RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 A0A0B4J2C4 111 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 F8VVB4 439 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 F8VWA3 439 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 CT62P0C5K7 136 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 RPL39P5Q59GN2 51 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 I3L3M4 83 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 HERVK_113P63121 156 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 R3HDMLQ9H3Y0 253 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 ZNF525Q8N782 197 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 PPIFP30405 207 aaKnown RBP7.41□□□□□ -1.22
NIPBL-202ENST00000448238 GREB1LQ9C091 1923 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-202ENST00000448238 JMJD7-PLA2G4BH0Y9G9 81 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 TIMM23O14925 209 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 CICQ96RK0 1608 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-202ENST00000448238 MON2Q7Z3U7 1717 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 TRAV1-1A0A0B4J248 108 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 SPINK2P20155 84 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 IL15RAQ13261 267 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 C16orf47Q6ZP98 133 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-202ENST00000448238 USMG5Q96IX5 58 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 PHLPP1O60346 1717 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 TMEM196Q5HYL7 178 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 PRSS41Q7RTY9 318 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 H0YGX0 51 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 RAMP3O60896 148 aa7.41□□□□□ -1.22
NIPBL-202ENST00000448238 COL16A1Q07092 1604 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-202ENST00000448238 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 CCL3L1P16619 93 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 SLC25A47Q6Q0C1 308 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 TM2D1Q9BX74 207 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 RNF114Q9Y508 228 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 SHPRHQ149N8 1683 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 SAP30O75446 220 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 RNASE2P10153 161 aaKnown RBP7.4□□□□□ -1.22
NIPBL-202ENST00000448238 CEND1Q8N111 149 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 CFHR4Q92496 578 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 TJP1Q07157 1748 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 NUP35Q8NFH5 326 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 TRBV5-7A0A0A0MS05 114 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 A0A1B0GW64 132 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 IGLV3-25P01717 112 aa7.4□□□□□ -1.22
NIPBL-202ENST00000448238 TBX6O95947 436 aaPredicted RBP7.4□□□□□ -1.23
NIPBL-202ENST00000448238 C3orf79P0CE67 100 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 MPZP25189 248 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 Q6ZT83 130 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 DEFB125Q8N687 156 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 USP17L23D6RBM5 183 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 SIVA1O15304 175 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 DEFB121Q5J5C9 76 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 Q6ZNB5 142 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 MSRB3Q8IXL7 192 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 C3orf36Q3SXR2 165 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 LINC01620Q4KN68 170 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 C20orf144Q9BQM9 153 aa7.4□□□□□ -1.23
NIPBL-202ENST00000448238 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 PPP1R32Q7Z5V6 425 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 GPHA2Q96T91 129 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 AGMATQ9BSE5 352 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 ETDCA0A1B0GVM5 59 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 LINC01555Q8NAE3 123 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 NDUFC2-KCTD14E9PQ53 114 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 DMRTC2Q8IXT2 367 aaPredicted RBP7.39□□□□□ -1.23
NIPBL-202ENST00000448238 TRAV3A0A0B4J244 114 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 TRAV40A0A0B4J280 105 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 IGKV4-1P06312 121 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 CRYGCP07315 174 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 SLC25A16P16260 332 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 TRGV9Q99603 122 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 IGLL5B9A064 214 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 IFI6P09912 130 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 CDKN1BP46527 198 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 RLFQ13129 1914 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 TOPAZ1Q8N9V7 1692 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 C14orf178Q8N769 122 aaPredicted RBP7.39□□□□□ -1.23
NIPBL-202ENST00000448238 S4R3C0 116 aa7.39□□□□□ -1.23
NIPBL-202ENST00000448238 K7EMI3 77 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 NPYP01303 97 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 HERV-K104P63124 156 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 ZIC1Q15915 447 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 NDUFA12Q9UI09 145 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 GNLYP22749 145 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV5-10-1A0A0J9YXX1 117 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 PMS2P5A8MQ11 134 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 TMEM14DPA8MWL7 114 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 LDLRAD1Q5T700 205 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 C8orf82Q6P1X6 216 aaPredicted RBP7.38□□□□□ -1.23
NIPBL-202ENST00000448238 CACNA1AO00555 2505 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 C5P01031 1676 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 PYYP10082 97 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 ZNF319Q9P2F9 582 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms