RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 Q6AWC8 147 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 GTSCR1Q86UQ5 136 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 NCKAP5O14513 1909 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 HOXA3O43365 443 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-213ENST00000448038 EMP1P54849 157 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 KCNS1Q96KK3 526 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 HSPB9Q9BQS6 159 aa5.93□□□□□ -1.46
SYNE1-213ENST00000448038 DAZ1Q9NQZ3 744 aaKnown RBP5.93□□□□□ -1.46
SYNE1-213ENST00000448038 ATRAIDQ6UW56 229 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 PRO1933Q9H354 126 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 RNF114Q9Y508 228 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 IGFBPL1Q8WX77 278 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 OSTCQ9NRP0 149 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 NPIPB5A8MRT5 1133 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 SOX21Q9Y651 276 aaPredicted RBP5.92□□□□□ -1.46
SYNE1-213ENST00000448038 COL5A1P20908 1838 aaPredicted RBP5.92□□□□□ -1.46
SYNE1-213ENST00000448038 DYSFO75923 2080 aa5.92□□□□□ -1.46
SYNE1-213ENST00000448038 IZUMO1RA6ND01 250 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 IGHV4-59P01825 116 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 TCRAP04437 139 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 IGHV4-38-2P0DP08 117 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 IGFL4Q6B9Z1 124 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 TMEM136Q6ZRR5 245 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 KIR2DL4Q99706 377 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 LEPROTL1O95214 131 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 YPEL3P61236 119 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-213ENST00000448038 SHANK2-AS3Q9BTD1 123 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 KLK15Q9H2R5 256 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 CENPVL3A0A0U1RRI6 287 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 C3orf56Q8N813 242 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 IMMP2LQ96T52 175 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 H7C1H1 209 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 ZNF843Q8N446 348 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 TRGV2A0A075B6R0 118 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 FCN3O75636 299 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 PPIFP30405 207 aaKnown RBP5.91□□□□□ -1.46
SYNE1-213ENST00000448038 CMC4P56277 68 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-213ENST00000448038 LCN12Q6JVE5 192 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 PRELID3AQ96N28 172 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 DERL1Q9BUN8 251 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 CEP295Q9C0D2 2601 aa5.91□□□□□ -1.46
SYNE1-213ENST00000448038 TRAV9-1A0A075B6T8 112 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 SCGB1D4Q6XE38 83 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 REC114Q7Z4M0 266 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 TMEM190Q8WZ59 177 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 TBX15Q96SF7 602 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 A0A1B0GW15 77 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 A0A1B0GW64 132 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 ZFP36P26651 326 aaKnown RBP5.9□□□□□ -1.46
SYNE1-213ENST00000448038 MST1LQ2TV78 715 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 OR10AG1Q8NH19 301 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 VPREB3Q9UKI3 123 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 TNFRSF18Q9Y5U5 241 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 Q1RN00 199 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 LYPD1Q8N2G4 141 aa5.9□□□□□ -1.46
SYNE1-213ENST00000448038 ZNF138P52744 262 aa5.9□□□□□ -1.47
SYNE1-213ENST00000448038 CA1P00915 261 aaPredicted RBP5.9□□□□□ -1.47
SYNE1-213ENST00000448038 OR1N2Q8NGR9 330 aa5.9□□□□□ -1.47
SYNE1-213ENST00000448038 PAM16Q9Y3D7 125 aa5.9□□□□□ -1.47
SYNE1-213ENST00000448038 EML5Q05BV3 1969 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 DSCAMO60469 2012 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 TRAV8-1A0A0A6YYK1 113 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 M0R3E3 92 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 ACTL10Q5JWF8 245 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 Q8TAT8 98 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 LINC01619G3V211 115 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 PPP1R17O96001 155 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 HTN3P15516 51 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 NUDT10Q8NFP7 164 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 NUDT11Q96G61 164 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 SMIM6P0DI80 62 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 HAPLN4Q86UW8 402 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 GPR61Q9BZJ8 451 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 TCTAP57738 103 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 ZNF502Q8TBZ5 544 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 LINC00477Q96M19 166 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 SPTBN4Q9H254 2564 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 IGLC7A0M8Q6 106 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 OR11H12B2RN74 326 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 IL15RAQ13261 267 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 C1QL4Q86Z23 238 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 TTC9CQ8N5M4 171 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 NRN1Q9NPD7 142 aa5.89□□□□□ -1.47
SYNE1-213ENST00000448038 CHD3Q12873 2000 aaKnown RBP5.88□□□□□ -1.47
SYNE1-213ENST00000448038 TRGV11A0A075B6L2 103 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 TCF21O43680 179 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 PSG3Q16557 428 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 C19orf54Q5BKX5 351 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 TCF23Q7RTU1 214 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 LINC01551Q86U37 167 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 TMEM183AQ8IXX5 376 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 ORMDL3Q8N138 153 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 TSKUQ8WUA8 353 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 HIVEP2P31629 2446 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 PDE6HQ13956 83 aa5.88□□□□□ -1.47
SYNE1-213ENST00000448038 Q8N7P7 452 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms