RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 FUT9Q9Y231 359 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 RHOBP62745 196 aa13.56□□□□□ -0.24
TRAPPC4-203ENST00000447216 S100A7AQ86SG5 101 aa13.56□□□□□ -0.24
TRAPPC4-203ENST00000447216 TMEM61Q8N0U2 210 aa13.56□□□□□ -0.24
TRAPPC4-203ENST00000447216 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-203ENST00000447216 MBP02144 154 aa13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 S100A7P31151 101 aa13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 INSL3P51460 131 aa13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 RPL11P62913 178 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 C1orf194Q5T5A4 169 aa13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 FAM90A2PQ658T7 463 aa13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 SSX7Q7RTT5 188 aa13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 MRPL32Q9BYC8 188 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-203ENST00000447216 A0A1W2PPV4 95 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 G3V4G9 280 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 HMGB3O15347 200 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 SNRPCP09234 159 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 CDC34P49427 236 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 SIGLEC15Q6ZMC9 328 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 FAM167A-AS1Q96KT0 104 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 SLC25A2Q9BXI2 301 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 SMAD5-AS1Q9Y6J3 95 aa13.54□□□□□ -0.24
TRAPPC4-203ENST00000447216 MGAM2Q2M2H8 2515 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 FHITP49789 147 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 FAM74A1Q5RGS3 127 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 ALKAL2Q6UX46 152 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 RBPMS2Q6ZRY4 209 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 RAB24Q969Q5 203 aa13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 ACTR3CQ9C0K3 210 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-203ENST00000447216 MRPS12O15235 138 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 PYYP10082 97 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 GALR1P47211 349 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 TFPI2P48307 235 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 GUCA2BQ16661 112 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 EIF5AL1Q6IS14 154 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 WFDC3Q8IUB2 231 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 FAM213BQ8TBF2 198 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 GPR61Q9BZJ8 451 aa13.52□□□□□ -0.25
TRAPPC4-203ENST00000447216 HELTA6NFD8 242 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 ZNF785A8K8V0 405 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 H3BTX0 84 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 WIPF1O43516 503 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 GP9P14770 177 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 RPL7P18124 248 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 BPIFA4PQ86YQ2 179 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 OR2K2Q8NGT1 345 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 C17orf77Q96MU5 243 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 GPR82Q96P67 336 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 MS4A6AQ9H2W1 248 aa13.51□□□□□ -0.25
TRAPPC4-203ENST00000447216 TRAV25A0A0B4J276 109 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 CTXND1A0A1B0GTU2 59 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 UMAD1C9J7I0 102 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 TSPAN4O14817 238 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 OR7C2O60412 319 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 ATF4P18848 351 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 SULT1A2P50226 295 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 KHDC3LQ587J8 217 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 ZNF503Q96F45 646 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 RNF24Q9Y225 148 aa13.5□□□□□ -0.25
TRAPPC4-203ENST00000447216 H3BQ15 152 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 DNASE2O00115 360 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 CD5P06127 495 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 OR10J4P0C629 311 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 TAS2R45P59539 299 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 LCN15Q6UWW0 184 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 PHYHIPLQ96FC7 376 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 PAXXQ9BUH6 204 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 OR51M1Q9H341 326 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
TRAPPC4-203ENST00000447216 STAG3L2P0CL84 134 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 STAG3L3P0CL85 134 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 ARL14EPLP0DKL9 152 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 IGLC2P0DOY2 106 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 FGF8P55075 233 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 NRN1Q9NPD7 142 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 ZNF586Q9NXT0 402 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 NOTCH1P46531 2555 aa13.48□□□□□ -0.25
TRAPPC4-203ENST00000447216 A0A087X0K7 114 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 MAP1LC3B2A6NCE7 125 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 UBE2L3P68036 154 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 PAFAH1B2P68402 229 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 FAM24BQ8N5W8 94 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 BLNKQ8WV28 456 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 RNF141Q8WVD5 230 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 SPAG8Q99932 426 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 MAP1LC3BQ9GZQ8 125 aa13.47□□□□□ -0.25
TRAPPC4-203ENST00000447216 A0A1B0GV50 99 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 K7EQG2 157 aa13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 HIST1H1EP10412 219 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-203ENST00000447216 RAB5CP51148 216 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms