RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
CCNE1-203ENST00000444983 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 RNF141Q8WVD5 230 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 C17orf77Q96MU5 243 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 ELOVL1Q9BW60 279 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 ACTR3CQ9C0K3 210 aaPredicted RBP11.43□□□□□ -0.58
CCNE1-203ENST00000444983 MLXQ9UH92 298 aa11.43□□□□□ -0.58
CCNE1-203ENST00000444983 IGHV3-66A0A0C4DH42 116 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 CTXND1A0A1B0GTU2 59 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 EIF3GO75821 320 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCNE1-203ENST00000444983 IFNA7P01567 189 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 MBD3L1Q8WWY6 194 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 RNF24Q9Y225 148 aa11.42□□□□□ -0.58
CCNE1-203ENST00000444983 NOTCH3Q9UM47 2321 aa11.41□□□□□ -0.58
CCNE1-203ENST00000444983 GP9P14770 177 aa11.41□□□□□ -0.58
CCNE1-203ENST00000444983 FAM213BQ8TBF2 198 aa11.41□□□□□ -0.58
CCNE1-203ENST00000444983 NARS2Q96I59 477 aaKnown RBP11.41□□□□□ -0.58
CCNE1-203ENST00000444983 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
CCNE1-203ENST00000444983 SMAD5-AS1Q9Y6J3 95 aa11.41□□□□□ -0.58
CCNE1-203ENST00000444983 DEFB114Q30KQ6 69 aa11.4□□□□□ -0.58
CCNE1-203ENST00000444983 BPIFA4PQ86YQ2 179 aa11.4□□□□□ -0.58
CCNE1-203ENST00000444983 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.58
CCNE1-203ENST00000444983 GRAMD2BQ96HH9 432 aa11.4□□□□□ -0.58
CCNE1-203ENST00000444983 GPR82Q96P67 336 aa11.4□□□□□ -0.58
CCNE1-203ENST00000444983 TMEM231Q9H6L2 316 aa11.4□□□□□ -0.58
CCNE1-203ENST00000444983 TRAV1-1A0A0B4J248 108 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.59
CCNE1-203ENST00000444983 WIPF1O43516 503 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 IGLV1-51P01701 117 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 IGLC2P0DOY2 106 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 RPL7P18124 248 aaKnown RBP11.4□□□□□ -0.59
CCNE1-203ENST00000444983 BMI1P35226 326 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 TAS2R45P59539 299 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 NDUFA5Q16718 116 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.59
CCNE1-203ENST00000444983 SAT2Q96F10 170 aaPredicted RBP11.4□□□□□ -0.59
CCNE1-203ENST00000444983 ZNF705EA8MWA4 302 aaPredicted RBP11.39□□□□□ -0.59
CCNE1-203ENST00000444983 SAP30O75446 220 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 CD5P06127 495 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 CD33P20138 364 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 KHDC3LQ587J8 217 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 SIGLEC15Q6ZMC9 328 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 PQLC2Q6ZP29 291 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 FXYD5Q96DB9 178 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 OR51M1Q9H341 326 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 UBQLN2Q9UHD9 624 aa11.39□□□□□ -0.59
CCNE1-203ENST00000444983 MAP1LC3B2A6NCE7 125 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 HELTA6NFD8 242 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 H3BQ15 152 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 H2AFB1P0C5Y9 115 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 PYYP10082 97 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 INSL3P51460 131 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 PRR31Q5SQ13 230 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 ZNF767PQ75MW2 155 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 LRRC20Q8TCA0 184 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 MAP1LC3BQ9GZQ8 125 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
CCNE1-203ENST00000444983 A0A087X0K7 114 aa11.37□□□□□ -0.59
CCNE1-203ENST00000444983 RGS13O14921 159 aa11.37□□□□□ -0.59
CCNE1-203ENST00000444983 CXorf1O96002 111 aa11.37□□□□□ -0.59
CCNE1-203ENST00000444983 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
CCNE1-203ENST00000444983 LCN15Q6UWW0 184 aa11.37□□□□□ -0.59
CCNE1-203ENST00000444983 SFT2D1Q8WV19 159 aa11.37□□□□□ -0.59
CCNE1-203ENST00000444983 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
CCNE1-203ENST00000444983 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
CCNE1-203ENST00000444983 OR7C2O60412 319 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 NMBP08949 121 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 GALR1P47211 349 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 FGF8P55075 233 aaPredicted RBP11.36□□□□□ -0.59
CCNE1-203ENST00000444983 BLOC1S1P78537 153 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 C9orf66Q5T8R8 295 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 ZNF586Q9NXT0 402 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 TSPAN4O14817 238 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 OR10J4P0C629 311 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
CCNE1-203ENST00000444983 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 OR2K2Q8NGT1 345 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 DYNLRB2Q8TF09 96 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 TMPRSS5Q9H3S3 457 aa11.36□□□□□ -0.59
CCNE1-203ENST00000444983 IZUMO1RA6ND01 250 aa11.35□□□□□ -0.59
CCNE1-203ENST00000444983 SOCS3O14543 225 aa11.35□□□□□ -0.59
CCNE1-203ENST00000444983 NBEAP1P0C6P0 100 aa11.35□□□□□ -0.59
CCNE1-203ENST00000444983 IGLL1P15814 213 aa11.35□□□□□ -0.59
CCNE1-203ENST00000444983 GCHFRP30047 84 aa11.35□□□□□ -0.59
CCNE1-203ENST00000444983 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
CCNE1-203ENST00000444983 TRBV19A0A075B6N1 114 aa11.34□□□□□ -0.59
CCNE1-203ENST00000444983 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms