RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 AP2S1P53680 142 aaPredicted RBP11.89□□□□□ -0.51
USP39-205ENST00000442708 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
USP39-205ENST00000442708 LINC00305Q7Z4B0 112 aa11.89□□□□□ -0.51
USP39-205ENST00000442708 ASCL2Q99929 193 aa11.89□□□□□ -0.51
USP39-205ENST00000442708 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
USP39-205ENST00000442708 DNAJC4Q9NNZ3 241 aa11.89□□□□□ -0.51
USP39-205ENST00000442708 NRN1Q9NPD7 142 aa11.89□□□□□ -0.51
USP39-205ENST00000442708 ELOA3CA0A087WX78 387 aaPredicted RBP11.88□□□□□ -0.51
USP39-205ENST00000442708 TRAV5A0A0B4J249 113 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 SOCS3O14543 225 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 MRPS12O15235 138 aaKnown RBP11.88□□□□□ -0.51
USP39-205ENST00000442708 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 DEFB131AP59861 70 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 Q6ZRG5 221 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
USP39-205ENST00000442708 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
USP39-205ENST00000442708 ARPC5O15511 151 aa11.87□□□□□ -0.51
USP39-205ENST00000442708 IFNA5P01569 189 aa11.87□□□□□ -0.51
USP39-205ENST00000442708 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
USP39-205ENST00000442708 AGRNO00468 2067 aa11.87□□□□□ -0.51
USP39-205ENST00000442708 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
USP39-205ENST00000442708 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
USP39-205ENST00000442708 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
USP39-205ENST00000442708 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
USP39-205ENST00000442708 NBEAL2Q6ZNJ1 2754 aa11.86□□□□□ -0.51
USP39-205ENST00000442708 DNAH9Q9NYC9 4486 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 GALR1P47211 349 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
USP39-205ENST00000442708 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 GPR82Q96P67 336 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 PFDN5Q99471 154 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 MFFQ9GZY8 342 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 TENM3Q9P273 2699 aa11.85□□□□□ -0.51
USP39-205ENST00000442708 C17orf112F2Z3M2 114 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
USP39-205ENST00000442708 RPL7P18124 248 aaKnown RBP11.84□□□□□ -0.51
USP39-205ENST00000442708 S100A7P31151 101 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 CMC4P56277 68 aaPredicted RBP11.84□□□□□ -0.51
USP39-205ENST00000442708 DEFB1P60022 68 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 CD300CQ08708 224 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 HAGHQ16775 308 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 HSD17B11Q8NBQ5 300 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
USP39-205ENST00000442708 SEPSECSQ9HD40 501 aaKnown RBP11.84□□□□□ -0.51
USP39-205ENST00000442708 A0A087X0K7 114 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 TRAV8-2A0A0B4J237 113 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 CXCL2P19875 107 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 ZNF266Q14584 549 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 IGFL4Q6B9Z1 124 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 MIR17HGQ75NE6 70 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 S100A7AQ86SG5 101 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 TCTE3Q8IZS6 198 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 SH3BGRL3Q9H299 93 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 KCNIP2Q9NS61 270 aa11.83□□□□□ -0.52
USP39-205ENST00000442708 HMSDA8MTL9 139 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 H3BQ15 152 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 H3BTX0 84 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
USP39-205ENST00000442708 ATF4P18848 351 aaPredicted RBP11.82□□□□□ -0.52
USP39-205ENST00000442708 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 KCNRGQ8N5I3 272 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 FAM167A-AS1Q96KT0 104 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 TIMM9Q9Y5J7 89 aa11.82□□□□□ -0.52
USP39-205ENST00000442708 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
USP39-205ENST00000442708 ISLRO14498 428 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP39-205ENST00000442708 IGLC2P0DOY2 106 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 PSMB3P49720 205 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 MEOX2P50222 304 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 SNRPD3P62318 126 aaKnown RBP11.81□□□□□ -0.52
USP39-205ENST00000442708 BPIFA4PQ86YQ2 179 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 LINC00052Q96N35 136 aa11.81□□□□□ -0.52
USP39-205ENST00000442708 SLC17A3O00476 420 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 PYYP10082 97 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 RAB2AP61019 212 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 ZNF345Q14585 488 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 GDF5OSQ5U4N7 250 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 C16orf92Q96LL3 132 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 TM2D3Q9BRN9 247 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 RETNQ9HD89 108 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 ZNF586Q9NXT0 402 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 RNF24Q9Y225 148 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 FUT9Q9Y231 359 aa11.8□□□□□ -0.52
USP39-205ENST00000442708 BORCS7-ASMTA0A0B4J1R7 106 aa11.79□□□□□ -0.52
USP39-205ENST00000442708 PRB4P10163 310 aaPredicted RBP11.79□□□□□ -0.52
USP39-205ENST00000442708 ID1P41134 155 aa11.79□□□□□ -0.52
USP39-205ENST00000442708 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
USP39-205ENST00000442708 AKAP14Q86UN6 197 aa11.79□□□□□ -0.52
USP39-205ENST00000442708 OR2G3Q8NGZ4 309 aa11.79□□□□□ -0.52
USP39-205ENST00000442708 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms