RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 GPR82Q96P67 336 aa10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 RPP21Q9H633 154 aaKnown RBP10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 INSIG2Q9Y5U4 225 aa10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 FAM90A27PA6NNH2 459 aa10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV1-8P0DP01 117 aa10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 SRSF12Q8WXF0 261 aaKnown RBP10.45□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV1-24A0A0C4DH33 117 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 TCRAP04437 139 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 FAM106CPP0CH98 169 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 HBBP68871 147 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 RNF151Q2KHN1 245 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 FAM106AQ4KMX7 169 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 C7orf69Q9H7B7 122 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 SERTM2A0A1B0GWG4 89 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 OR8B3Q8NGG8 313 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 ZFP30Q9Y2G7 519 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 C20orf202A1L168 122 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 E7EQL1 145 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 RNASE6Q93091 150 aaKnown RBP10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 TMUB1Q9BVT8 246 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 C19orf24Q9BVV8 132 aa10.44□□□□□ -0.74
SLC48A1-201ENST00000442218 CFAP46Q8IYW2 2715 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 FNDC10F2Z333 226 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 FAM169BQ8N8A8 192 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 ZNF596Q8TC21 504 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 NAA38Q9BRA0 125 aaKnown RBP10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 ONECUT1Q9UBC0 465 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 CACNA1AO00555 2505 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 POLQO75417 2590 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 TRAV9-2A0A087WT02 112 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 KLRD1Q13241 179 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 TMEM70Q9BUB7 260 aa10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.43□□□□□ -0.74
SLC48A1-201ENST00000442218 A0A087X0K7 114 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 NUDT3O95989 172 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 GP9P14770 177 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 HTR1DP28221 377 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 HES1Q14469 280 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 LDLRAD2Q5SZI1 272 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 TMEM186Q96B77 213 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 VAMP3Q15836 100 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 KLHDC1Q8N7A1 406 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 C22orf15Q8WYQ4 148 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 C8orf49Q96NF6 230 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 HIGD1AQ9Y241 93 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 SIGLEC9Q9Y336 463 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV2-26A0A0B4J1V2 119 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 MYCNOSP40205 109 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 ARF6P62330 175 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 TMEM133Q9H2Q1 129 aa10.42□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV3OR16-13A0A075B7E8 117 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV3-74A0A0B4J1X5 117 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 A8MWL6 223 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 FCGR2BP31994 310 aaPredicted RBP10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 LOXL1Q08397 574 aaPredicted RBP10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 FAM120AOSQ5T036 256 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 PPP1R27Q86WC6 154 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 SLC25A39Q9BZJ4 359 aaPredicted RBP10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 LINC00574Q9H8X3 128 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 NCR2O95944 276 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 UCNP55089 124 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 RPEQ96AT9 228 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 RASL11BQ9BPW5 248 aa10.41□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV1-3A0A0C4DH29 117 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 IGHV1-69-2A0A0G2JMI3 117 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 A0A1B0GXF2 115 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 SMKR1H3BMG3 65 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 IL4P05112 153 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 PCP4P48539 62 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 MEF2CQ06413 473 aaPredicted RBP10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 THAP8Q8NA92 274 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 C5orf17Q8NAS9 161 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 RBM14Q96PK6 669 aaKnown RBP10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 LINC00614P0C842 121 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 UQCRFS1P47985 274 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 TMEM155Q4W5P6 130 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 Q8TAT8 98 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 MLST8Q9BVC4 326 aa10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 MRPL27Q9P0M9 148 aaKnown RBP10.4□□□□□ -0.74
SLC48A1-201ENST00000442218 TMEM213A2RRL7 107 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 SHISA9B4DS77 424 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 SYS1-DBNDD2H3BUS1 97 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 Q86TA4 180 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 MUC15Q8N387 334 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 ZANQ9Y493 2812 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 OR2T8A6NH00 312 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 ZNF785A8K8V0 405 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 TIMM23O14925 209 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 APOHP02749 345 aaPredicted RBP10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 IGLC1P0CG04 106 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 266.6 ms