RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 SSX7Q7RTT5 188 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 LYZL2Q7Z4W2 148 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 SMIM4Q8WVI0 70 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 SCGB3A2Q96PL1 93 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 SLC25A22Q9H936 323 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 PRR13Q9NZ81 148 aa9.87□□□□□ -0.83
PTPRN-205ENST00000440552 PIGBOS1A0A0B4J2F0 54 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 A0A1W2PPQ1 181 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 BOLA2-SMG1P6H3BVE0 249 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 PITX3O75364 302 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 AKR1C4P17516 323 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 CTF1Q16619 201 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 BAP18Q8IXM2 172 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 OR51S1Q8NGJ8 323 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 OR1S1Q8NH92 325 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 MIXL1Q9H2W2 232 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 Q9H3A6 140 aa9.86□□□□□ -0.83
PTPRN-205ENST00000440552 CTDSPLO15194 276 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 KRTAP10-2P60368 255 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 ZNF493Q6ZR52 646 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 BPIFCQ8NFQ6 507 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 LINC01587Q99440 93 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 UPK3BQ9BT76 320 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 TMEM147Q9BVK8 224 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 KRTAP1-5Q9BYS1 174 aa9.85□□□□□ -0.83
PTPRN-205ENST00000440552 TIMM8BQ9Y5J9 83 aaPredicted RBP9.85□□□□□ -0.83
PTPRN-205ENST00000440552 DUXBA0A1W2PPF3 345 aa9.84□□□□□ -0.83
PTPRN-205ENST00000440552 ANXA3P12429 323 aa9.84□□□□□ -0.83
PTPRN-205ENST00000440552 CLVS1Q8IUQ0 354 aaPredicted RBP9.84□□□□□ -0.83
PTPRN-205ENST00000440552 RABL2AQ9UBK7 228 aaPredicted RBP9.84□□□□□ -0.83
PTPRN-205ENST00000440552 SCP2D1Q9UJQ7 156 aa9.84□□□□□ -0.83
PTPRN-205ENST00000440552 RABL2BQ9UNT1 228 aa9.84□□□□□ -0.83
PTPRN-205ENST00000440552 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 PRSS46E5RG02 174 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 MED6O75586 246 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 SLC25A6P12236 298 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 ORM2P19652 201 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 IGFL4Q6B9Z1 124 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 TMEM144Q7Z5S9 345 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 RNF182Q8N6D2 247 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 OR8A1Q8NGG7 326 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 RXFP4Q8TDU9 374 aa9.83□□□□□ -0.84
PTPRN-205ENST00000440552 CIB3Q96Q77 187 aaPredicted RBP9.83□□□□□ -0.84
PTPRN-205ENST00000440552 SLC25A39Q9BZJ4 359 aaPredicted RBP9.83□□□□□ -0.84
PTPRN-205ENST00000440552 NAA50Q9GZZ1 169 aaKnown RBP9.83□□□□□ -0.84
PTPRN-205ENST00000440552 ANKRD20A5PA0PJZ0 165 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 H3BNG1 76 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 H3BRN7 92 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 IAPPP10997 89 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 RPL7P18124 248 aaKnown RBP9.82□□□□□ -0.84
PTPRN-205ENST00000440552 M6PRP20645 277 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 RPP30P78346 268 aaKnown RBP9.82□□□□□ -0.84
PTPRN-205ENST00000440552 TMEM182Q6ZP80 229 aaPredicted RBP9.82□□□□□ -0.84
PTPRN-205ENST00000440552 RNASE8Q8TDE3 154 aaKnown RBP9.82□□□□□ -0.84
PTPRN-205ENST00000440552 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
PTPRN-205ENST00000440552 GNPNAT1Q96EK6 184 aaPredicted RBP9.82□□□□□ -0.84
PTPRN-205ENST00000440552 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 FAT1Q14517 4588 aa9.82□□□□□ -0.84
PTPRN-205ENST00000440552 TRAV26-1A0A087WT03 109 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 A0A087X0K7 114 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 CTDSP2O14595 271 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 RGS5O15539 181 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 ADAP1O75689 374 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 CXCL3P19876 107 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 GATA2P23769 480 aaPredicted RBP9.81□□□□□ -0.84
PTPRN-205ENST00000440552 RHOBP62745 196 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 HIST1H1AQ02539 215 aaPredicted RBP9.81□□□□□ -0.84
PTPRN-205ENST00000440552 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
PTPRN-205ENST00000440552 NOP10Q9NPE3 64 aaKnown RBP9.81□□□□□ -0.84
PTPRN-205ENST00000440552 PAIP2BQ9ULR5 123 aaKnown RBP9.81□□□□□ -0.84
PTPRN-205ENST00000440552 MRPS16Q9Y3D3 137 aaKnown RBP9.81□□□□□ -0.84
PTPRN-205ENST00000440552 H7BYZ3 331 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 CDKN1BP46527 198 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 FGL1Q08830 312 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 OR5I1Q13606 314 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 PSG3Q16557 428 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 ESRGQ1W209 222 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 LRTM2Q8N967 370 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 PPP1R14DQ9NXH3 145 aa9.8□□□□□ -0.84
PTPRN-205ENST00000440552 ZNF701M0R085 212 aaPredicted RBP9.79□□□□□ -0.84
PTPRN-205ENST00000440552 SYNGR2O43760 224 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 HTN1P15515 57 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 PLP1P60201 277 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 RAP2BP61225 183 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 AKR1C1Q04828 323 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 IL18Q14116 193 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 UHRF2Q96PU4 802 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 HIGD1AQ9Y241 93 aa9.79□□□□□ -0.84
PTPRN-205ENST00000440552 HYPMO75409 117 aa9.78□□□□□ -0.84
PTPRN-205ENST00000440552 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
PTPRN-205ENST00000440552 S100A7AQ86SG5 101 aa9.78□□□□□ -0.84
PTPRN-205ENST00000440552 DIRAS2Q96HU8 199 aa9.78□□□□□ -0.84
PTPRN-205ENST00000440552 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
PTPRN-205ENST00000440552 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms