RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 SLC45A2Q9UMX9 530 aa14.28□□□□□ -0.12
TRIM39-210ENST00000440271 KCNIP3Q9Y2W7 256 aa14.28□□□□□ -0.12
TRIM39-210ENST00000440271 TIMM8BQ9Y5J9 83 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-210ENST00000440271 A0A1W2PPQ1 181 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 DISC1C4P0D8 188 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 BOLA2-SMG1P6H3BVE0 249 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 ZNF182P17025 639 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-210ENST00000440271 OR5I1Q13606 314 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 THAP8Q8NA92 274 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 C16orf74Q96GX8 76 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 UPK3BQ9BT76 320 aa14.27□□□□□ -0.13
TRIM39-210ENST00000440271 TRAV26-1A0A087WT03 109 aa14.26□□□□□ -0.13
TRIM39-210ENST00000440271 A0A0B4J2A0 478 aa14.26□□□□□ -0.13
TRIM39-210ENST00000440271 LYZL2Q7Z4W2 148 aa14.26□□□□□ -0.13
TRIM39-210ENST00000440271 GPR82Q96P67 336 aa14.26□□□□□ -0.13
TRIM39-210ENST00000440271 NOP10Q9NPE3 64 aaKnown RBP14.26□□□□□ -0.13
TRIM39-210ENST00000440271 SHPKQ9UHJ6 478 aa14.26□□□□□ -0.13
TRIM39-210ENST00000440271 A0A087WXM4 84 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 ORM2P19652 201 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 SSBP1Q04837 148 aaKnown RBP14.25□□□□□ -0.13
TRIM39-210ENST00000440271 ESRGQ1W209 222 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 TMEM144Q7Z5S9 345 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 RXFP4Q8TDU9 374 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 AP3S1Q92572 193 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 ZNF503Q96F45 646 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 FAT1Q14517 4588 aa14.25□□□□□ -0.13
TRIM39-210ENST00000440271 RAB11AP62491 216 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 RHOBP62745 196 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 FGL1Q08830 312 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 ZNF493Q6ZR52 646 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 LYPD1Q8N2G4 141 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 ZNF738Q8NE65 137 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 OR10J6PQ8NGY7 276 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 OR1S1Q8NH92 325 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 ZNF586Q9NXT0 402 aa14.24□□□□□ -0.13
TRIM39-210ENST00000440271 A0A0J9YY99 117 aa14.23□□□□□ -0.13
TRIM39-210ENST00000440271 M6PRP20645 277 aa14.23□□□□□ -0.13
TRIM39-210ENST00000440271 GATA2P23769 480 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-210ENST00000440271 HIST1H1AQ02539 215 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-210ENST00000440271 TMEM182Q6ZP80 229 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-210ENST00000440271 PPP1R14DQ9NXH3 145 aa14.23□□□□□ -0.13
TRIM39-210ENST00000440271 PGPEP1Q9NXJ5 209 aa14.23□□□□□ -0.13
TRIM39-210ENST00000440271 PAIP2BQ9ULR5 123 aaKnown RBP14.23□□□□□ -0.13
TRIM39-210ENST00000440271 MRPS16Q9Y3D3 137 aaKnown RBP14.23□□□□□ -0.13
TRIM39-210ENST00000440271 ZNF701M0R085 212 aaPredicted RBP14.22□□□□□ -0.13
TRIM39-210ENST00000440271 AKAIN1P0CW23 69 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 AKR1C4P17516 323 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 XGP55808 180 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 BPIFCQ8NFQ6 507 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 OR8A1Q8NGG7 326 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 OR51S1Q8NGJ8 323 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 RNASE8Q8TDE3 154 aaKnown RBP14.22□□□□□ -0.13
TRIM39-210ENST00000440271 PRRT1Q99946 306 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 TMEM147Q9BVK8 224 aa14.22□□□□□ -0.13
TRIM39-210ENST00000440271 IAPPP10997 89 aa14.21□□□□□ -0.13
TRIM39-210ENST00000440271 S100A7P31151 101 aa14.21□□□□□ -0.13
TRIM39-210ENST00000440271 TMEM263Q8WUH6 116 aaKnown RBP14.21□□□□□ -0.13
TRIM39-210ENST00000440271 HOXA5P20719 270 aa14.2□□□□□ -0.14
TRIM39-210ENST00000440271 LINC00315P59091 139 aa14.2□□□□□ -0.14
TRIM39-210ENST00000440271 MRPS10P82664 201 aaKnown RBP14.2□□□□□ -0.14
TRIM39-210ENST00000440271 LINC00612Q8N6U2 182 aa14.2□□□□□ -0.14
TRIM39-210ENST00000440271 PITX3O75364 302 aa14.19□□□□□ -0.14
TRIM39-210ENST00000440271 ADAP1O75689 374 aa14.19□□□□□ -0.14
TRIM39-210ENST00000440271 CXCL3P19876 107 aa14.19□□□□□ -0.14
TRIM39-210ENST00000440271 FUSP35637 526 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRIM39-210ENST00000440271 Q5VSD8 79 aa14.19□□□□□ -0.14
TRIM39-210ENST00000440271 Q6ZRN7 208 aaPredicted RBP14.19□□□□□ -0.14
TRIM39-210ENST00000440271 CLVS1Q8IUQ0 354 aaPredicted RBP14.19□□□□□ -0.14
TRIM39-210ENST00000440271 MIXL1Q9H2W2 232 aa14.19□□□□□ -0.14
TRIM39-210ENST00000440271 PTTG2Q9NZH5 202 aa14.19□□□□□ -0.14
TRIM39-210ENST00000440271 PRSS46E5RG02 174 aa14.18□□□□□ -0.14
TRIM39-210ENST00000440271 H3BNG1 76 aa14.18□□□□□ -0.14
TRIM39-210ENST00000440271 H3BRN7 92 aa14.18□□□□□ -0.14
TRIM39-210ENST00000440271 H7BYZ3 331 aa14.18□□□□□ -0.14
TRIM39-210ENST00000440271 PRB4P10163 310 aaPredicted RBP14.18□□□□□ -0.14
TRIM39-210ENST00000440271 CDKN1BP46527 198 aa14.18□□□□□ -0.14
TRIM39-210ENST00000440271 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
TRIM39-210ENST00000440271 GAGE12BA1L429 117 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 GAGE7O76087 117 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 GAGE12FP0CL80 117 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 GAGE12GP0CL81 117 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 GAGE12IP0CL82 117 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 RPL7P18124 248 aaKnown RBP14.17□□□□□ -0.14
TRIM39-210ENST00000440271 SRPXP78539 464 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 PSG3Q16557 428 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 FRZBQ92765 325 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 SCGB3A2Q96PL1 93 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 SHANK2-AS3Q9BTD1 123 aa14.17□□□□□ -0.14
TRIM39-210ENST00000440271 ANXA3P12429 323 aa14.16□□□□□ -0.14
TRIM39-210ENST00000440271 NAA50Q9GZZ1 169 aaKnown RBP14.16□□□□□ -0.14
TRIM39-210ENST00000440271 SCP2D1Q9UJQ7 156 aa14.16□□□□□ -0.14
TRIM39-210ENST00000440271 RLN2P04090 185 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 RPP30P78346 268 aaKnown RBP14.15□□□□□ -0.14
TRIM39-210ENST00000440271 AKR1C1Q04828 323 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 CTF1Q16619 201 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 CDPF1Q6NVV7 123 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 CCDC28AQ8IWP9 274 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 LRRC20Q8TCA0 184 aa14.15□□□□□ -0.14
TRIM39-210ENST00000440271 RPUSD4Q96CM3 377 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms