RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GSG1LQ6UXU4 331 aa14.38□□□□□ -0.11
SHROOM1-204ENST00000440118 S100A7AQ86SG5 101 aa14.38□□□□□ -0.11
SHROOM1-204ENST00000440118 CHAC2Q8WUX2 184 aa14.38□□□□□ -0.11
SHROOM1-204ENST00000440118 SCRT1Q9BWW7 348 aa14.38□□□□□ -0.11
SHROOM1-204ENST00000440118 IGLL5B9A064 214 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 PLA2G10O15496 165 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 HYPMO75409 117 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 CCNKO75909 580 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 TCRBP04435 133 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 SELENOTP62341 195 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 TMEM14EPQ6UXP3 125 aa14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 TMEM182Q6ZP80 229 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 RCL1Q9Y2P8 373 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-204ENST00000440118 C5orf51A6NDU8 294 aa14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 TAS2R30P59541 319 aa14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 TEPPQ6URK8 271 aa14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 NRARPQ7Z6K4 114 aa14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 SLC25A39Q9BZJ4 359 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 NPVFQ9HCQ7 196 aa14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 LSM5Q9Y4Y9 91 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-204ENST00000440118 BIRC6Q9NR09 4857 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 ELOA3CA0A087WX78 387 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 TRAV10A0A0B4J240 114 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 F6UB75 175 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 H3BRN7 92 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 MBPP02686 304 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 RPL7P18124 248 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 PAX9P55771 341 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 TCTAP57738 103 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 PSG9Q00887 426 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 SLC38A11Q08AI6 406 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 FAM78BQ5VT40 261 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 Q6ZTC4 211 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 ZNF431Q8TF32 576 aaPredicted RBP14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 SEC22CQ9BRL7 303 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 ARL6Q9H0F7 186 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 GOLT1BQ9Y3E0 138 aa14.35□□□□□ -0.11
SHROOM1-204ENST00000440118 PMS2P5A8MQ11 134 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 FNDC10F2Z333 226 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 EMP1P54849 157 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 LGALS9CQ6DKI2 356 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 ZNF546Q86UE3 836 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 SHANK2-AS3Q9BTD1 123 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 SLC35B3Q9H1N7 401 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 RNF24Q9Y225 148 aa14.34□□□□□ -0.11
SHROOM1-204ENST00000440118 A0A0J9YX75 114 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 C7orf66A4D0T2 115 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 GOSR2O14653 212 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 H2AFB2P0C5Z0 115 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 PVALBP20472 110 aaPredicted RBP14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 CAV2P51636 162 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 S100A10P60903 97 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF767PQ75MW2 155 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 LRRC20Q8TCA0 184 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 C20orf173Q96LM9 149 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 UHRF2Q96PU4 802 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 CELA1Q9UNI1 258 aa14.33□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF705AQ6ZN79 300 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 AKAP14Q86UN6 197 aa14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 C12orf45Q8N5I9 185 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF709Q8N972 641 aa14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF738Q8NE65 137 aa14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 CLUHP3Q96NS8 147 aa14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 TMEM208Q9BTX3 173 aa14.32□□□□□ -0.12
SHROOM1-204ENST00000440118 TMEM189A5PLL7 270 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 SMIM9A6NGZ8 99 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 DEDDO75618 318 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 RNF182Q8N6D2 247 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 MARVELD1Q9BSK0 173 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 GGACTQ9BVM4 153 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 ARV1Q9H2C2 271 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 RFNGQ9Y644 331 aa14.31□□□□□ -0.12
SHROOM1-204ENST00000440118 K7EPK0 472 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 COX7A2P2O60397 106 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 PRAF2O60831 178 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 DUSP14O95147 198 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 HBE1P02100 147 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 PLP1P60201 277 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 RAB31Q13636 194 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 PXDC1Q5TGL8 231 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 IGFL4Q6B9Z1 124 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 RPP25LQ8N5L8 163 aaKnown RBP14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 NEU1Q99519 415 aa14.3□□□□□ -0.12
SHROOM1-204ENST00000440118 DEFB131BA0A096LNP1 70 aa14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF705FA8MVS1 300 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 INMT-MINDY4F8WBC2 141 aa14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 AGPAT2O15120 278 aa14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF705DP0CH99 300 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 ZNF705BP0CI00 300 aaPredicted RBP14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 SPART-AS1P0CW21 52 aa14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 C2orf50Q96LR7 162 aa14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 PPP1R14DQ9NXH3 145 aa14.29□□□□□ -0.12
SHROOM1-204ENST00000440118 IGHV4-4A0A075B6R2 117 aa14.28□□□□□ -0.12
SHROOM1-204ENST00000440118 CST7O76096 145 aa14.28□□□□□ -0.12
SHROOM1-204ENST00000440118 CNN1P51911 297 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-204ENST00000440118 ARL16Q0P5N6 197 aa14.28□□□□□ -0.12
SHROOM1-204ENST00000440118 C12orf74Q32Q52 190 aa14.28□□□□□ -0.12
SHROOM1-204ENST00000440118 STX12Q86Y82 276 aa14.28□□□□□ -0.12
SHROOM1-204ENST00000440118 TEX48A0A1B0GUV7 120 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms