RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 KLF12Q9Y4X4 402 aa10.76□□□□□ -0.69
HERPUD1-204ENST00000439977 CSN3P07498 182 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 HBBP68871 147 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 KLRD1Q13241 179 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 A8MWL6 223 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 M0QZK8 103 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 TOMM40O96008 361 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 LTAP01374 205 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 STPG4Q8N801 248 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 SPTBN1Q01082 2364 aaKnown RBP10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 ZFHX3Q15911 3703 aa10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 HRNRQ86YZ3 2850 aaPredicted RBP10.75□□□□□ -0.69
HERPUD1-204ENST00000439977 A0A1B0GXF2 115 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 SIAH2O43255 324 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 HNRNPA3P51991 378 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 B9A039 149 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 M0R3E3 92 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 HES1Q14469 280 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 I3L2K1 104 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 IGHV3-23P01764 117 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 CA7P43166 264 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 CDSNQ15517 529 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 FMC1Q96HJ9 113 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 CHRDL1Q9BU40 450 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 PRSS22Q9GZN4 317 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 UQCR10Q9UDW1 63 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 CELSR1Q9NYQ6 3014 aa10.74□□□□□ -0.69
HERPUD1-204ENST00000439977 C19orf71A6NCJ1 209 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 C2orf70A6NJV1 201 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 CHEK1O14757 476 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 DLEU1O43261 78 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 Q86TA4 180 aa10.73□□□□□ -0.69
HERPUD1-204ENST00000439977 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 IL4P05112 153 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 IGLL1P15814 213 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 BTF3P20290 206 aaKnown RBP10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 FCGR2BP31994 310 aaPredicted RBP10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 GOLT1BQ9Y3E0 138 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 OR2J3O76001 311 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 IGLV2-11P01706 119 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 PMCHL2Q9BQD1 86 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 LAMTOR2Q9Y2Q5 125 aa10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 MAP1AP78559 2803 aaPredicted RBP10.72□□□□□ -0.69
HERPUD1-204ENST00000439977 TMSB15BA0A087X1C1 80 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 IGHV3-35A0A0C4DH35 117 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 ZNF785A8K8V0 405 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 K7EIM0 57 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 PVRIGQ6DKI7 326 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 RBPMS2Q6ZRY4 209 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 RBM14Q96PK6 669 aaKnown RBP10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 SCNM1Q9BWG6 230 aa10.71□□□□□ -0.69
HERPUD1-204ENST00000439977 SPTAN1Q13813 2472 aaKnown RBP10.71□□□□□ -0.7
HERPUD1-204ENST00000439977 ATP5L2Q7Z4Y8 100 aa10.71□□□□□ -0.7
HERPUD1-204ENST00000439977 OR8B3Q8NGG8 313 aa10.71□□□□□ -0.7
HERPUD1-204ENST00000439977 OTORQ9NRC9 128 aa10.71□□□□□ -0.7
HERPUD1-204ENST00000439977 IGHV1-24A0A0C4DH33 117 aa10.7□□□□□ -0.7
HERPUD1-204ENST00000439977 hDV102S1A0JD36 115 aa10.7□□□□□ -0.7
HERPUD1-204ENST00000439977 ARMS2P0C7Q2 107 aa10.7□□□□□ -0.7
HERPUD1-204ENST00000439977 TNFRSF14Q92956 283 aa10.7□□□□□ -0.7
HERPUD1-204ENST00000439977 TSPOP30536 169 aa10.7□□□□□ -0.7
HERPUD1-204ENST00000439977 PLP1P60201 277 aa10.7□□□□□ -0.7
HERPUD1-204ENST00000439977 NCBP2LA6PVI3 153 aaKnown RBP10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 HTR1DP28221 377 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 RBPJQ06330 500 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 KLHDC1Q8N7A1 406 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 TRBV19A0A075B6N1 114 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 TRAV9-2A0A087WT02 112 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 LINC00614P0C842 121 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 FAM120AOSQ5T036 256 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 ERASQ7Z444 233 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 BPIFA4PQ86YQ2 179 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
HERPUD1-204ENST00000439977 OR4C46A6NHA9 309 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 UNQ5815/PRO19632Q6UWF5 114 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 OR4F17Q8NGA8 305 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 C8orf49Q96NF6 230 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 LOC102724200A0A096LPH7 203 aaPredicted RBP10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 NDUFB8O95169 186 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 LIPFP07098 398 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 CRIP1P50238 77 aa10.68□□□□□ -0.7
HERPUD1-204ENST00000439977 CCL21O00585 134 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms