RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SMCO3A2RU48 225 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 TMEM189A5PLL7 270 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 FNDC10F2Z333 226 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 H3BRN7 92 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 PLA2G10O15496 165 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 AMBPP02760 352 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 IL5P05113 134 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 PLP1P60201 277 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 SELENOTP62341 195 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 ZBTB8BQ8NAP8 495 aaPredicted RBP14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 SHANK2-AS3Q9BTD1 123 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 SLC25A39Q9BZJ4 359 aaPredicted RBP14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 DOK5Q9P104 306 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 RFNGQ9Y644 331 aa14.54□□□□□ -0.08
NCKIPSD-206ENST00000439518 METTL15P1P0C7V9 234 aa14.53□□□□□ -0.08
NCKIPSD-206ENST00000439518 SPART-AS1P0CW21 52 aa14.53□□□□□ -0.08
NCKIPSD-206ENST00000439518 TAS2R30P59541 319 aa14.53□□□□□ -0.08
NCKIPSD-206ENST00000439518 AMTNQ6UX39 209 aa14.53□□□□□ -0.08
NCKIPSD-206ENST00000439518 C1orf158Q8N1D5 194 aa14.53□□□□□ -0.08
NCKIPSD-206ENST00000439518 DNAH10Q8IVF4 4471 aa14.53□□□□□ -0.08
NCKIPSD-206ENST00000439518 TRAV8-2A0A0B4J237 113 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 K7EPK0 472 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 TSC22D2O75157 780 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 HYPMO75409 117 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 LINC00869P0C866 280 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 RRAS2P62070 204 aaPredicted RBP14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 HIGD1AQ9Y241 93 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 RCL1Q9Y2P8 373 aaKnown RBP14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 GOLT1BQ9Y3E0 138 aa14.52□□□□□ -0.09
NCKIPSD-206ENST00000439518 SCGB1D2O95969 90 aa14.51□□□□□ -0.09
NCKIPSD-206ENST00000439518 EMP1P54849 157 aa14.51□□□□□ -0.09
NCKIPSD-206ENST00000439518 RAP2BP61225 183 aa14.51□□□□□ -0.09
NCKIPSD-206ENST00000439518 OR10P1Q8NGE3 313 aa14.51□□□□□ -0.09
NCKIPSD-206ENST00000439518 NPVFQ9HCQ7 196 aa14.51□□□□□ -0.09
NCKIPSD-206ENST00000439518 GSKIPQ9P0R6 139 aa14.51□□□□□ -0.09
NCKIPSD-206ENST00000439518 MBPP02686 304 aaPredicted RBP14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 RPL7P18124 248 aaKnown RBP14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 ARL16Q0P5N6 197 aa14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 IGFL4Q6B9Z1 124 aa14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 UHRF2Q96PU4 802 aa14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 C20orf85Q9H1P6 137 aa14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 NDUFA13Q9P0J0 144 aa14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 DKK2Q9UBU2 259 aa14.5□□□□□ -0.09
NCKIPSD-206ENST00000439518 C7orf66A4D0T2 115 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 LYRM1O43325 122 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 OR5G3P0C626 314 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 CNN1P51911 297 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 TEPPQ6URK8 271 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 PATE2Q6UY27 113 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 RNF182Q8N6D2 247 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 IGF2BP2-AS1Q96M15 143 aa14.49□□□□□ -0.09
NCKIPSD-206ENST00000439518 DNAH6Q9C0G6 4158 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 TEX48A0A1B0GUV7 120 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 DUSP14O95147 198 aaKnown RBP14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 HBE1P02100 147 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 FAM222AQ5U5X8 452 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 NDUFAF3Q9BU61 184 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 GGACTQ9BVM4 153 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 ARL6Q9H0F7 186 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 MGAT4CQ9UBM8 478 aa14.48□□□□□ -0.09
NCKIPSD-206ENST00000439518 A0A087X0K7 114 aa14.47□□□□□ -0.09
NCKIPSD-206ENST00000439518 LOC102723971A0A1B0GUV8 181 aa14.47□□□□□ -0.09
NCKIPSD-206ENST00000439518 TCRBP04435 133 aa14.47□□□□□ -0.09
NCKIPSD-206ENST00000439518 FGL1Q08830 312 aa14.47□□□□□ -0.09
NCKIPSD-206ENST00000439518 SLC38A11Q08AI6 406 aa14.47□□□□□ -0.09
NCKIPSD-206ENST00000439518 OR11H7Q8NGC8 314 aa14.47□□□□□ -0.09
NCKIPSD-206ENST00000439518 CCSO14618 274 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 MRPS12O15235 138 aaKnown RBP14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 CRXO43186 299 aaPredicted RBP14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 RRN3P1Q2M238 152 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 PXDC1Q5TGL8 231 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 S100A7AQ86SG5 101 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 ZNF738Q8NE65 137 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 NIPSNAP3BQ9BS92 247 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 ARV1Q9H2C2 271 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 PLA2G2EQ9NZK7 142 aa14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 YTHDF2Q9Y5A9 579 aaKnown RBP14.46□□□□□ -0.09
NCKIPSD-206ENST00000439518 M0R2Z0 102 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 GOSR2O14653 212 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 AGPAT2O15120 278 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 CXCL3P19876 107 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 OXA1LQ15070 435 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 SPINK13Q1W4C9 94 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 ZNF546Q86UE3 836 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 FAM210BQ96KR6 192 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 NUDT15Q9NV35 164 aa14.45□□□□□ -0.1
NCKIPSD-206ENST00000439518 TRAV6A0A075B6T7 132 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 P0DMU3 169 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 FAM231AP0DMU4 169 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 FAM231CP0DMU5 169 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 ZNF846Q147U1 533 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 POM121L12Q8N7R1 296 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 ZNF431Q8TF32 576 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 SEC22CQ9BRL7 303 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 TMEM208Q9BTX3 173 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 C11orf1Q9H5F2 150 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 RNF24Q9Y225 148 aa14.44□□□□□ -0.1
NCKIPSD-206ENST00000439518 PSG3Q16557 428 aa14.43□□□□□ -0.1
NCKIPSD-206ENST00000439518 MGST2Q99735 147 aa14.43□□□□□ -0.1
NCKIPSD-206ENST00000439518 L7N2F9 121 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms