RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FOXI2Q6ZQN5 318 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 LRRC20Q8TCA0 184 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 SHANK2-AS3Q9BTD1 123 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 SLC25A32Q9H2D1 315 aa7.67□□□□□ -1.18
MCF2L-216ENST00000439475 H3BMM0 161 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 COX7A2P2O60397 106 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 SIX6O95475 246 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 HLA-DRB4P13762 266 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 OR1L4Q8NGR5 311 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 SAV1Q9H4B6 383 aaPredicted RBP7.66□□□□□ -1.18
MCF2L-216ENST00000439475 C11orf1Q9H5F2 150 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 HLA-DRB4X5D2U9 266 aa7.66□□□□□ -1.18
MCF2L-216ENST00000439475 CXorf65A6NEN9 183 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 SOCS3O14543 225 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 MPDU1O75352 247 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 PET100P0DJ07 73 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 MIFP14174 115 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 BAXQ07812 192 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 LRRC37A5PQ49AS3 106 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 LINC00305Q7Z4B0 112 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 BPIFA4PQ86YQ2 179 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 OR4B1Q8NGF8 309 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 CLUHP3Q96NS8 147 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 PFDN5Q99471 154 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 SCRT1Q9BWW7 348 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 MFFQ9GZY8 342 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 DNAJC4Q9NNZ3 241 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 WDR83OSQ9Y284 106 aa7.65□□□□□ -1.18
MCF2L-216ENST00000439475 IGSF23A1L1A6 192 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 NUPR2A6NF83 97 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 JTBO76095 146 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 DUSP14O95147 198 aaKnown RBP7.64□□□□□ -1.19
MCF2L-216ENST00000439475 RPL29P47914 159 aaKnown RBP7.64□□□□□ -1.19
MCF2L-216ENST00000439475 VWC2Q2TAL6 325 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 C10orf113Q5VZT2 155 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 C11orf45Q8TAV5 145 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 UHRF2Q96PU4 802 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 MGST2Q99735 147 aa7.64□□□□□ -1.19
MCF2L-216ENST00000439475 KLK5Q9Y337 293 aaPredicted RBP7.64□□□□□ -1.19
MCF2L-216ENST00000439475 COL7A1Q02388 2944 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 A0A087X0K7 114 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 UBE2L5PA0A1B0GUS4 154 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 IGKV3-20P01619 116 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 CXCL2P19875 107 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 C4BPBP20851 252 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 FGF7P21781 194 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 B2MP61769 119 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 PSG9Q00887 426 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 PMS2P11Q13670 270 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 MIC13Q5XKP0 118 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 PATE2Q6UY27 113 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 ZNF709Q8N972 641 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 OR5C1Q8NGR4 320 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 CHAC2Q8WUX2 184 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 PPP1R1CQ8WVI7 109 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 SLC50A1Q9BRV3 221 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
MCF2L-216ENST00000439475 CLEC5AQ9NY25 188 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 XCL2Q9UBD3 114 aa7.63□□□□□ -1.19
MCF2L-216ENST00000439475 A0A0J9YX75 114 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 ZNF705EA8MWA4 302 aaPredicted RBP7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PTTG1O95997 202 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 AMBPP02760 352 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 GIG44P09565 113 aaPredicted RBP7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PRR20EP86478 221 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PRR20CP86479 221 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PRR20DP86480 221 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PRR20BP86481 221 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PRR20AP86496 221 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 EWSR1Q01844 656 aaKnown RBP eCLIP7.62□□□□□ -1.19
MCF2L-216ENST00000439475 NHLH2Q02577 135 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 OPCMLQ14982 345 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 GDF5OSQ5U4N7 250 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 LCN15Q6UWW0 184 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 TMEM37Q8WXS4 190 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 KCNIP2Q9NS61 270 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 SLC39A9Q9NUM3 307 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 PPP1R14DQ9NXH3 145 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 OR5AC2Q9NZP5 309 aa7.62□□□□□ -1.19
MCF2L-216ENST00000439475 SMIM9A6NGZ8 99 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 C17orf112F2Z3M2 114 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 MPC2O95563 127 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 PSG3Q16557 428 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 GUK1Q16774 197 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 FAM78BQ5VT40 261 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 CEMP1Q6PRD7 247 aaPredicted RBP7.61□□□□□ -1.19
MCF2L-216ENST00000439475 CSNK1G2-AS1Q8NCQ2 148 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 ZNF738Q8NE65 137 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 THAP6Q8TBB0 222 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 GOLT1BQ9Y3E0 138 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 PXMP4Q9Y6I8 212 aa7.61□□□□□ -1.19
MCF2L-216ENST00000439475 IGHV4-28A0A0C4DH34 117 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 LCE6AA0A183 80 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 F6UB75 175 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 H0YIZ8 118 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 CXCL3P19876 107 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 H2BFSP57053 126 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 FXYD7P58549 80 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 DEFB1P60022 68 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms