RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 TRAV25A0A0B4J276 109 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 CD33P20138 364 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 GALR1P47211 349 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 C9orf66Q5T8R8 295 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 ADAMTSL5Q6ZMM2 481 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 ZNF767PQ75MW2 155 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 OR8I2Q8N0Y5 310 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 DYNLRB2Q8TF09 96 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 SAT2Q96F10 170 aaPredicted RBP9.61□□□□□ -0.87
SCLT1-202ENST00000439369 FAM167A-AS1Q96KT0 104 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 UBQLN2Q9UHD9 624 aa9.61□□□□□ -0.87
SCLT1-202ENST00000439369 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 WIPF1O43516 503 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
SCLT1-202ENST00000439369 STAG3L2P0CL84 134 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 STAG3L3P0CL85 134 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 BLOC1S1P78537 153 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 GUK1Q16774 197 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 PRR31Q5SQ13 230 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 MORN5Q5VZ52 161 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 FAM90A2PQ658T7 463 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 MIR17HGQ75NE6 70 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 SLC25A2Q9BXI2 301 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 SLC25A22Q9H936 323 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 MLXQ9UH92 298 aa9.6□□□□□ -0.87
SCLT1-202ENST00000439369 A0A087X0K7 114 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 TRAV2A0A0B4J234 112 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 MRPS12O15235 138 aaKnown RBP9.59□□□□□ -0.87
SCLT1-202ENST00000439369 SAP30O75446 220 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 CXorf1O96002 111 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 IGLV1-51P01701 117 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 HBE1P02100 147 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 H2AFB1P0C5Y9 115 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 GP9P14770 177 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 ZNF726P1Q15940 193 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 TCF24Q7RTU0 167 aa9.59□□□□□ -0.87
SCLT1-202ENST00000439369 IGHV3-49A0A0A0MS15 119 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 MAP1LC3B2A6NCE7 125 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 ZNF705EA8MWA4 302 aaPredicted RBP9.58□□□□□ -0.88
SCLT1-202ENST00000439369 TSPAN4O14817 238 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 OR7C2O60412 319 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 ZNF253O75346 499 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
SCLT1-202ENST00000439369 FHITP49789 147 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 PAFAH1B2P68402 229 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 PDE6HQ13956 83 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 LEMD1Q68G75 181 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 SUN5Q8TC36 379 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 PAXXQ9BUH6 204 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 MAP1LC3BQ9GZQ8 125 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 OR51M1Q9H341 326 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 HRH4Q9H3N8 390 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 TMEM167BQ9NRX6 74 aa9.58□□□□□ -0.88
SCLT1-202ENST00000439369 IGHV3OR16-13A0A075B7E8 117 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 IGHV3-74A0A0B4J1X5 117 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 TRAV5A0A0B4J249 113 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 IGHV3-66A0A0C4DH42 116 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 ARL14EPLP0DKL9 152 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 IGLC2P0DOY2 106 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 ATF4P18848 351 aaPredicted RBP9.57□□□□□ -0.88
SCLT1-202ENST00000439369 EDN2P20800 178 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 PSMB3P49720 205 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 PPT1P50897 306 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 LCN12Q6JVE5 192 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 RBPMS2Q6ZRY4 209 aaKnown RBP9.57□□□□□ -0.88
SCLT1-202ENST00000439369 SFT2D1Q8WV19 159 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 SPAG8Q99932 426 aaPredicted RBP9.57□□□□□ -0.88
SCLT1-202ENST00000439369 NRN1Q9NPD7 142 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 CLEC5AQ9NY25 188 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 STAB1Q9NY15 2570 aa9.57□□□□□ -0.88
SCLT1-202ENST00000439369 ZNF785A8K8V0 405 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 RGS13O14921 159 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 NBEAP1P0C6P0 100 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 GCHFRP30047 84 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 UBE2L3P68036 154 aaKnown RBP9.56□□□□□ -0.88
SCLT1-202ENST00000439369 IFITM2Q01629 132 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 PMS2P11Q13670 270 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
SCLT1-202ENST00000439369 LCN15Q6UWW0 184 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 SSX7Q7RTT5 188 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 FXYD5Q96DB9 178 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 ZNF503Q96F45 646 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 ZMAT5Q9UDW3 170 aaKnown RBP9.56□□□□□ -0.88
SCLT1-202ENST00000439369 SMAD5-AS1Q9Y6J3 95 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 ARL2-SNX15V9GYD0 113 aa9.56□□□□□ -0.88
SCLT1-202ENST00000439369 TRBV19A0A075B6N1 114 aa9.55□□□□□ -0.88
SCLT1-202ENST00000439369 OR4C46A6NHA9 309 aa9.55□□□□□ -0.88
SCLT1-202ENST00000439369 RAB14P61106 215 aa9.55□□□□□ -0.88
SCLT1-202ENST00000439369 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
SCLT1-202ENST00000439369 TMEM61Q8N0U2 210 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms