RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PTHLHP12272 177 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 FABP4P15090 132 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 SDC2P34741 201 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 CA7P43166 264 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 FOXA3P55318 350 aaPredicted RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF816Q0VGE8 651 aaPredicted RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 C1orf140Q5VVS0 124 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 Q6AWC8 147 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 AMTNQ6UX39 209 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 Q6ZUT4 128 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 AAED1Q7RTV5 226 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TRAPPC6BQ86SZ2 158 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MSRB3Q8IXL7 192 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 C1orf174Q8IYL3 243 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 KCNRGQ8N5I3 272 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 YIPF7Q8N8F6 280 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 BPIFB6Q8NFQ5 453 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 OR2T10Q8NGZ9 312 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 OR10AC1Q8NH08 325 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 LINC01560Q8TB33 94 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MRPL30Q8TCC3 161 aaKnown RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 RPS4Y2Q8TD47 263 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 RAB2BQ8WUD1 216 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 PSMF1Q92530 271 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 GNPNAT1Q96EK6 184 aaPredicted RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 PEBP4Q96S96 227 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 PKMYT1Q99640 499 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 HIST1H2BLQ99880 126 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 RNF5Q99942 180 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 C21orf62Q9NYP8 219 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TAAR3PQ9P1P4 343 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MARCOQ9UEW3 520 aaPredicted RBP2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 AK3Q9UIJ7 227 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 LINC00312Q9Y6C7 94 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 TUBGCP6Q96RT7 1819 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MON2Q7Z3U7 1717 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 MYH6P13533 1939 aa2.11□□□□□ -2.07
LSM1P1-201ENST00000438629 RBBP6Q7Z6E9 1792 aaKnown RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 DOCK6Q96HP0 2047 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 SBF2Q86WG5 1849 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 RAPGEF6Q8TEU7 1601 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 MADDQ8WXG6 1647 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 RIC1Q4ADV7 1423 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 A0A087WXM4 84 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 IGHV1-3A0A0C4DH29 117 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 IGKV1-6A0A0C4DH72 117 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 TCRBV3S1A0A5B6 114 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 ODAMA1E959 279 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 DPRXA6NFQ7 191 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 OR51F1A6NGY5 319 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 A8MUN3 132 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 K7EP34 96 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 GEMIN2O14893 280 aaKnown RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF73O43830 326 aaPredicted RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 HRASP01112 189 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 LTAP01374 205 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 IGLV3-27P01718 113 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 FABP2P12104 132 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 NFYBP25208 207 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 CRYBB3P26998 211 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 SRP14P37108 136 aaKnown RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 AKR1C1Q04828 323 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 RRN3P1Q2M238 152 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 C9orf153Q5TBE3 101 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 EBLN2Q6P2I7 272 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 C22orf39Q6P5X5 142 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 ATOH7Q8N100 152 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 C10orf126Q8N4M7 172 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF721Q8TF20 911 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 ZNF431Q8TF32 576 aaPredicted RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 DCANP1Q8TF63 244 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 DPH3Q96FX2 82 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 NPVFQ9HCQ7 196 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 UQCR10Q9UDW1 63 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 MRPS16Q9Y3D3 137 aaKnown RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 CHCHD2Q9Y6H1 151 aaPredicted RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 LRRC7Q96NW7 1537 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 DUOX2Q9NRD8 1548 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 FANCMQ8IYD8 2048 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 COL1A2P08123 1366 aa2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 NUP214P35658 2090 aaPredicted RBP2.1□□□□□ -2.07
LSM1P1-201ENST00000438629 PTPRFP10586 1907 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 MYH8P13535 1937 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 RPRD2Q5VT52 1461 aaKnown RBP2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 C2orf16Q68DN1 1984 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 CLASP1Q7Z460 1538 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 ARAP3Q8WWN8 1544 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 IGKV1D-17A0A075B6S4 117 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 TRAV9-1A0A075B6T8 112 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 A0A0J9YW62 118 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 A0A1B0GW54 56 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 IRGMA1A4Y4 181 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 TMEM262E9PQX1 116 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 M0R233 179 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 TAX1BP3O14907 124 aa2.09□□□□□ -2.07
LSM1P1-201ENST00000438629 UQCRQO14949 82 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms