RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.4□□□□□ -1.549e-7■■■■■ 32.9
CSDE1-205ENST00000438362 TMEM238LA0A1B0GVL6 79 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 A6NJY4 79 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 H3BUT2 72 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 PPBPP02775 128 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 NPSP0C0P6 89 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 P0C879 139 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 SEC11AP67812 179 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 CHD3Q12873 2000 aaKnown RBP5.4□□□□□ -1.55
CSDE1-205ENST00000438362 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 LDLRAD2Q5SZI1 272 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 FOXC2Q99958 501 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 GFRA4Q9GZZ7 299 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 ZNF492Q9P255 531 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 OR11H12B2RN74 326 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 UCNP55089 124 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 ATP5G2Q06055 141 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 OR11H1Q8NG94 326 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 OR11H2Q8NH07 326 aa5.4□□□□□ -1.55
CSDE1-205ENST00000438362 IGHV3-66A0A0C4DH42 116 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 A0A0G2JNJ9 132 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 FAM231BA6NCW3 169 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 SH2D7A6NKC9 451 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-205ENST00000438362 D6R8Y8 96 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 CIDEAO60543 219 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 AMMECR1LQ6DCA0 310 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 LYPD1Q8N2G4 141 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 OR4X2Q8NGF9 303 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 NEU4Q8WWR8 484 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-205ENST00000438362 ASCL2Q99929 193 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 Q9UFV3 132 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 SPCS1Q9Y6A9 102 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 NPIPB5A8MRT5 1133 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 BUB1B-PAK6H3BSN5 160 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 M0R3E3 92 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 PF4V1P10720 104 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 KLF17Q5JT82 389 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-205ENST00000438362 TEX36Q5VZQ5 186 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 LYZL1Q6UWQ5 148 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 DMRTC2Q8IXT2 367 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-205ENST00000438362 NXT2Q9NPJ8 142 aaKnown RBP5.39□□□□□ -1.55
CSDE1-205ENST00000438362 ID1P41134 155 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 LEPP41159 167 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 PSMB2P49721 201 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 DLX1P56177 255 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 PSG3Q16557 428 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 TMEM155Q4W5P6 130 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 TTC9CQ8N5M4 171 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 MCRIP2Q9BUT9 160 aaKnown RBP5.39□□□□□ -1.55
CSDE1-205ENST00000438362 SPRY4Q9C004 299 aa5.39□□□□□ -1.55
CSDE1-205ENST00000438362 A0A087X0K7 114 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 ARMS2P0C7Q2 107 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 PLA2G5P39877 138 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 GAGE1Q13065 139 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 ZNF672Q499Z4 452 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-205ENST00000438362 LINC00311Q8N616 119 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 DDB2Q92466 427 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 FAM168AQ92567 244 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 SLC50A1Q9BRV3 221 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 FNDC4Q9H6D8 234 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-205ENST00000438362 LRP4O75096 1905 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 IGKV2-40A0A087WW87 121 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-205ENST00000438362 LOC107984156A0A0G2JMH3 177 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 M0R381 172 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 IGKV2D-40P01614 121 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-205ENST00000438362 IGLL1P15814 213 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 HSD52Q0P140 79 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 TDRG1Q3Y452 100 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 PLA2G2CQ5R387 149 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 ARL17AQ8IVW1 177 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 KMT2EQ8IZD2 1858 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 PPIFP30405 207 aaKnown RBP5.38□□□□□ -1.55
CSDE1-205ENST00000438362 ASPHD1Q5U4P2 390 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 CLEC19AQ6UXS0 136 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 OR9G4Q8NGQ1 327 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 OR2K2Q8NGT1 345 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 VKORC1Q9BQB6 163 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 SHANK2-AS3Q9BTD1 123 aa5.38□□□□□ -1.55
CSDE1-205ENST00000438362 LHBP01229 141 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 TDGF1P13385 188 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 BRWD1-AS2P59051 145 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 GUSBP1Q15486 140 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 STPG4Q8N801 248 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 THAP8Q8NA92 274 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 TPSG1Q9NRR2 321 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 TECTAO75443 2155 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 NCR2O95944 276 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 LOXP28300 417 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-205ENST00000438362 C5orf64Q2M2E5 130 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 OR1N2Q8NGR9 330 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 WIPF2Q8TF74 440 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-205ENST00000438362 JKAMPQ9P055 326 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 FAM215AQ9Y5M1 114 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 PROP1O75360 226 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 TRGV3P03979 118 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 CNTFRP26992 372 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 CEACAM8P31997 349 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-205ENST00000438362 RHOGP84095 191 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms