RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 IGLC2P0DOY2 106 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NPPCP23582 126 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ATRAIDQ6UW56 229 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 OR4F17Q8NGA8 305 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 BLNKQ8WV28 456 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 UBE2E2Q96LR5 201 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 OR5B12Q96R08 314 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 METTL26Q96S19 204 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NKX6-2Q9C056 277 aaPredicted RBP10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 H3BQ15 152 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SNRPCP09234 159 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 RPL7P18124 248 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CRYBB3P26998 211 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 MYCNOSP40205 109 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 FAM74A3Q4VXF1 159 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 RPUSD4Q96CM3 377 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 C20orf24Q9BUV8 137 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 PARLQ9H300 379 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ZNF586Q9NXT0 402 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 U3KQE9 123 aa10.42□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ZNF727A8MUV8 499 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 H3BTX0 84 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 BUB3O43684 328 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SCO1O75880 301 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NDUFA7O95182 113 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SUMO1P63165 101 aaKnown RBP10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SMIM7Q9BQ49 75 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ELOVL1Q9BW60 279 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
HLA-DPA1-243ENST00000437811 TRBV19A0A075B6N1 114 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ZNF207O43670 478 aaKnown RBP10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CRLF1O75462 422 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NDUFB4O95168 129 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 RANP62826 216 aaKnown RBP10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ZFHX3Q15911 3703 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ZNF674Q2M3X9 581 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 C1orf194Q5T5A4 169 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 OR8I2Q8N0Y5 310 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 TVP23CQ96ET8 276 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 GPR82Q96P67 336 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NOTCH2Q04721 2471 aa10.4□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CDX1P47902 265 aaPredicted RBP10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 PDE6HQ13956 83 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 AWAT1Q58HT5 328 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 DERL1Q9BUN8 251 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 Q9H3A6 140 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 OTORQ9NRC9 128 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 NAT8Q9UHE5 227 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 IGHV4OR15-8A0A075B7B6 117 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 A0A087WW49 117 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 A0A087X0K7 114 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 PGPA6NDG6 321 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 M0R036 132 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TCF21O43680 179 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 APOHP02749 345 aaPredicted RBP10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ATF4P18848 351 aaPredicted RBP10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RPEL1Q2QD12 228 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C16orf54Q6UWD8 224 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 LYPD1Q8N2G4 141 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C2CD4CQ8TF44 421 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C17orf77Q96MU5 243 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SMAD5-AS1Q9Y6J3 95 aa10.39□□□□□ -0.75
HLA-DPA1-243ENST00000437811 IGHV3OR16-13A0A075B7E8 117 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 IGHV3-49A0A0A0MS15 119 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 IGHV3-74A0A0B4J1X5 117 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 K7EMT4 169 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SLC17A3O00476 420 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 GALR1P47211 349 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 PNRC1Q12796 327 aaPredicted RBP10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SIGLEC15Q6ZMC9 328 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 REC114Q7Z4M0 266 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
HLA-DPA1-243ENST00000437811 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 PEX7O00628 323 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ZNF253O75346 499 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 AKR1C3P42330 323 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RHEBQ15382 184 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 KHDC1LQ5JSQ8 128 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C18orf65Q6ZTR6 163 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C4orf3Q8WVX3 66 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 GLMPQ8WWB7 406 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms