RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IGHG2P01859 326 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 CTSGP08311 255 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 IER3P46695 156 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 COA6Q5JTJ3 125 aaKnown RBP16.45■□□□□ 0.22
PTPRF-207ENST00000436724 ACTL10Q5JWF8 245 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 RNF125Q96EQ8 232 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 SLC25A39Q9BZJ4 359 aaPredicted RBP16.45■□□□□ 0.22
PTPRF-207ENST00000436724 MRPL27Q9P0M9 148 aaKnown RBP16.45■□□□□ 0.22
PTPRF-207ENST00000436724 IGHV3-35A0A0C4DH35 117 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 ADMP35318 185 aa16.45■□□□□ 0.22
PTPRF-207ENST00000436724 SONP18583 2426 aaKnown RBP16.45■□□□□ 0.22
PTPRF-207ENST00000436724 M0QZK8 103 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 GPR183P32249 361 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 YPEL3P61236 119 aaPredicted RBP16.44■□□□□ 0.22
PTPRF-207ENST00000436724 SUMO1P63165 101 aaKnown RBP16.44■□□□□ 0.22
PTPRF-207ENST00000436724 USF2Q15853 346 aaPredicted RBP16.44■□□□□ 0.22
PTPRF-207ENST00000436724 KLK9Q2XQG4 91 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 ZNF502Q8TBZ5 544 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 VN1R17PQ8TDU5 208 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 PACRGQ96M98 296 aaPredicted RBP16.44■□□□□ 0.22
PTPRF-207ENST00000436724 KLK9Q9UKQ9 250 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 IGF1P05019 195 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 CRIP2P52943 208 aaPredicted RBP16.44■□□□□ 0.22
PTPRF-207ENST00000436724 KCNIP4Q6PIL6 250 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 OCC1Q8TAD7 63 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 PRDM13Q9H4Q3 707 aa16.44■□□□□ 0.22
PTPRF-207ENST00000436724 XKRY2A2RUG3 117 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 H3BTX0 84 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 IL17RELQ6ZVW7 336 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 BLNKQ8WV28 456 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 CCDC140Q96MF4 163 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 WI2-2373I1.2A0A1W2PRP0 233 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 CLEC3BP05452 202 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 SFRP2Q96HF1 295 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 IMMP2LQ96T52 175 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 ARL2-SNX15V9GYD0 113 aa16.43■□□□□ 0.22
PTPRF-207ENST00000436724 ACANP16112 2415 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 IGHV3OR16-8A0A075B7F1 116 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 GP9P14770 177 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 CRYBB3P26998 211 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 FOXL1Q12952 345 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 TMEM95Q3KNT9 176 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 DNLZQ5SXM8 178 aa16.42■□□□□ 0.22
PTPRF-207ENST00000436724 A0A1W2PRE2 83 aa16.41■□□□□ 0.22
PTPRF-207ENST00000436724 AMBPP02760 352 aa16.41■□□□□ 0.22
PTPRF-207ENST00000436724 RPL15P61313 204 aaKnown RBP16.41■□□□□ 0.22
PTPRF-207ENST00000436724 CLEC19AQ6UXS0 136 aa16.41■□□□□ 0.22
PTPRF-207ENST00000436724 C9orf139Q6ZV77 190 aa16.41■□□□□ 0.22
PTPRF-207ENST00000436724 TXN2Q99757 166 aa16.41■□□□□ 0.22
PTPRF-207ENST00000436724 FCGR2BP31994 310 aaPredicted RBP16.41■□□□□ 0.22
PTPRF-207ENST00000436724 ZNF320A2RRD8 509 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 PPIFP30405 207 aaKnown RBP16.4■□□□□ 0.22
PTPRF-207ENST00000436724 RANP62826 216 aaKnown RBP16.4■□□□□ 0.22
PTPRF-207ENST00000436724 STXBP6Q8NFX7 210 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 ZNF414Q96IQ9 312 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 TRGV3P03979 118 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 FAM209BQ5JX69 171 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 Q6YL49 198 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 ZNF600Q6ZNG1 722 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 C11orf52Q96A22 123 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 SHANK2-AS3Q9BTD1 123 aa16.4■□□□□ 0.22
PTPRF-207ENST00000436724 H3BRN7 92 aa16.39■□□□□ 0.21
PTPRF-207ENST00000436724 NBEAP1P0C6P0 100 aa16.39■□□□□ 0.21
PTPRF-207ENST00000436724 HNF1AP20823 631 aa16.39■□□□□ 0.21
PTPRF-207ENST00000436724 HOXA3O43365 443 aaPredicted RBP16.38■□□□□ 0.21
PTPRF-207ENST00000436724 TEX38Q6PEX7 206 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 LCNL1Q6ZST4 164 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 GNB4Q9HAV0 340 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 K7EN84 100 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 ATP5G2Q06055 141 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 OR10G8Q8NGN5 311 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 EEF1AKMT3Q96AZ1 226 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 KLK15Q9H2R5 256 aa16.38■□□□□ 0.21
PTPRF-207ENST00000436724 TPPP2P59282 170 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 OR5R1Q8NH85 324 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 FOXC2Q99958 501 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 VPREB3Q9UKI3 123 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 JOSD1Q15040 202 aaPredicted RBP16.37■□□□□ 0.21
PTPRF-207ENST00000436724 ZNF329Q86UD4 541 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 DUX5Q96PT3 197 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 ZNF586Q9NXT0 402 aa16.37■□□□□ 0.21
PTPRF-207ENST00000436724 TRAPPC1Q9Y5R8 145 aa16.36■□□□□ 0.21
PTPRF-207ENST00000436724 TRBV7-1A0A0A6YYK4 115 aa16.36■□□□□ 0.21
PTPRF-207ENST00000436724 SCGB2A1O75556 95 aa16.36■□□□□ 0.21
PTPRF-207ENST00000436724 BTF3L4Q96K17 158 aa16.36■□□□□ 0.21
PTPRF-207ENST00000436724 LINC00479Q96M42 142 aa16.36■□□□□ 0.21
PTPRF-207ENST00000436724 FAM223BA6NKX1 122 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 C9JCJ5 164 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 MYCNOSP40205 109 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 CNN1P51911 297 aaKnown RBP16.35■□□□□ 0.21
PTPRF-207ENST00000436724 TOMM20LQ6UXN7 152 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 FAM223AQ8IWN6 122 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 C17orf77Q96MU5 243 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 CUBNO60494 3623 aa16.35■□□□□ 0.21
PTPRF-207ENST00000436724 GZMBP10144 247 aa16.34■□□□□ 0.21
PTPRF-207ENST00000436724 PF4V1P10720 104 aa16.34■□□□□ 0.21
PTPRF-207ENST00000436724 GNG5P63218 68 aa16.34■□□□□ 0.21
PTPRF-207ENST00000436724 TMEM14CQ9P0S9 112 aa16.34■□□□□ 0.21
PTPRF-207ENST00000436724 LY96Q9Y6Y9 160 aa16.34■□□□□ 0.21
PTPRF-207ENST00000436724 NOTCH2Q04721 2471 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms