RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
CALD1-208ENST00000435928 BCL7BQ9BQE9 202 aa11.1□□□□□ -0.63
CALD1-208ENST00000435928 TMEM147Q9BVK8 224 aa11.1□□□□□ -0.63
CALD1-208ENST00000435928 LYRM9A8MSI8 78 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 WRBO00258 174 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 SYNGR2O43760 224 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 GATA2P23769 480 aaPredicted RBP11.09□□□□□ -0.63
CALD1-208ENST00000435928 TNFSF8P32971 234 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 OR11H7Q8NGC8 314 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 C17orf77Q96MU5 243 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 ATG101Q9BSB4 218 aa11.09□□□□□ -0.63
CALD1-208ENST00000435928 ZNF705GA8MUZ8 300 aaPredicted RBP11.08□□□□□ -0.64
CALD1-208ENST00000435928 NOL3O60936 208 aaKnown RBP11.08□□□□□ -0.64
CALD1-208ENST00000435928 TMBIM6P55061 237 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 AP3S2P59780 193 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 B2MP61769 119 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 FGL1Q08830 312 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 SPANXN5Q5MJ07 72 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 ACOT7LQ6ZUV0 252 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 BAP18Q8IXM2 172 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 RNF182Q8N6D2 247 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
CALD1-208ENST00000435928 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
CALD1-208ENST00000435928 H3BP45 60 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
CALD1-208ENST00000435928 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 TMEM182Q6ZP80 229 aaPredicted RBP11.07□□□□□ -0.64
CALD1-208ENST00000435928 TOMM5Q8N4H5 51 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
CALD1-208ENST00000435928 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 H3BRN7 92 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 BOLA2-SMG1P6H3BVE0 249 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 SFT2D2O95562 160 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 PRM2P04554 102 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 HOXB5P09067 269 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 TSPOP30536 169 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 PPP1R1AQ13522 171 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 PYDC2Q56P42 97 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 MCFD2Q8NI22 146 aa11.06□□□□□ -0.64
CALD1-208ENST00000435928 SLC25A39Q9BZJ4 359 aaPredicted RBP11.06□□□□□ -0.64
CALD1-208ENST00000435928 STRAPQ9Y3F4 350 aaKnown RBP11.06□□□□□ -0.64
CALD1-208ENST00000435928 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
CALD1-208ENST00000435928 H3BMQ9 156 aa11.05□□□□□ -0.64
CALD1-208ENST00000435928 RAP2BP61225 183 aa11.05□□□□□ -0.64
CALD1-208ENST00000435928 SLC25A21Q9BQT8 299 aaPredicted RBP11.05□□□□□ -0.64
CALD1-208ENST00000435928 HIGD1AQ9Y241 93 aa11.05□□□□□ -0.64
CALD1-208ENST00000435928 HSPG2P98160 4391 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 F5H768 121 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 NUDT3O95989 172 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 IL5P05113 134 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
CALD1-208ENST00000435928 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
CALD1-208ENST00000435928 CYP2G1PQ6ZSU1 146 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 TMEM256Q8N2U0 113 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 SHANK2-AS3Q9BTD1 123 aa11.04□□□□□ -0.64
CALD1-208ENST00000435928 NBDYA0A0U1RRE5 68 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 PLAC8L1A1L4L8 177 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 HYPMO75409 117 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 ATP5G1P05496 136 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 LINC00869P0C866 280 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 AZU1P20160 251 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 ATP5G3P48201 142 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 RHOBP62745 196 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 DEDD2Q8WXF8 326 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 PPP1R14DQ9NXH3 145 aa11.03□□□□□ -0.64
CALD1-208ENST00000435928 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 OR5G3P0C626 314 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 TNP2Q05952 138 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 FCN2Q15485 313 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 S100A7AQ86SG5 101 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 C6orf223Q8N319 242 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 OR8A1Q8NGG7 326 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 ZNRF2Q8NHG8 242 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 LRRC20Q8TCA0 184 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 C16orf74Q96GX8 76 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 UHRF2Q96PU4 802 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 LINC01587Q99440 93 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 V9GYH0 126 aa11.02□□□□□ -0.65
CALD1-208ENST00000435928 A0A087X0K7 114 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 SSSCA1O60232 199 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 HTN1P15515 57 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 CXCL3P19876 107 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 CCL18P55774 89 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 TAS2R60P59551 318 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 SELENOTP62341 195 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
CALD1-208ENST00000435928 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 PSENENQ9NZ42 101 aa11.01□□□□□ -0.65
CALD1-208ENST00000435928 CBY3A6NI87 242 aa11□□□□□ -0.65
CALD1-208ENST00000435928 ADAP1O75689 374 aa11□□□□□ -0.65
CALD1-208ENST00000435928 PLP1P60201 277 aa11□□□□□ -0.65
CALD1-208ENST00000435928 UBE2MP61081 183 aaKnown RBP11□□□□□ -0.65
CALD1-208ENST00000435928 RRAS2P62070 204 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms