RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RNASE7Q9H1E1 156 aaKnown RBP12.59□□□□□ -0.39
NEDD4-202ENST00000435532 MRPL27Q9P0M9 148 aaKnown RBP12.59□□□□□ -0.39
NEDD4-202ENST00000435532 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 GVINP1Q7Z2Y8 2422 aa12.58□□□□□ -0.39
NEDD4-202ENST00000435532 WDR86Q86TI4 376 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 TCRAP04437 139 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 LY6G6FQ5SQ64 297 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 SPRY4Q9C004 299 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 IGHV4-30-2A0A087WSY4 118 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 A0A087WWC5 75 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
NEDD4-202ENST00000435532 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 INTS1Q8N201 2190 aaKnown RBP12.58□□□□□ -0.4
NEDD4-202ENST00000435532 IGHV3-53P01767 116 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 TCTEX1D4Q5JR98 221 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 SPATA31B1PQ5VZV4 182 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 TSKUQ8WUA8 353 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
NEDD4-202ENST00000435532 MDC1Q14676 2089 aaKnown RBP12.57□□□□□ -0.4
NEDD4-202ENST00000435532 C9orf66Q5T8R8 295 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 A0A087X0M5 115 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 A0A1B0GX30 115 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 G3V318 75 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
NEDD4-202ENST00000435532 SLC25A20O43772 301 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 DEFB130BP0DP73 79 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 DEFB130AP0DP74 79 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 RNF144BQ7Z419 303 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 NUDT11Q96G61 164 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 IGHV4-61A0A0C4DH41 118 aa12.57□□□□□ -0.4
NEDD4-202ENST00000435532 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
NEDD4-202ENST00000435532 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
NEDD4-202ENST00000435532 ARID1AO14497 2285 aa12.56□□□□□ -0.4
NEDD4-202ENST00000435532 ESPL1Q14674 2120 aa12.56□□□□□ -0.4
NEDD4-202ENST00000435532 CA1P00915 261 aaPredicted RBP12.56□□□□□ -0.4
NEDD4-202ENST00000435532 TMEM158Q8WZ71 300 aa12.56□□□□□ -0.4
NEDD4-202ENST00000435532 WFDC1Q9HC57 220 aa12.56□□□□□ -0.4
NEDD4-202ENST00000435532 NDUFA4L2Q9NRX3 87 aa12.56□□□□□ -0.4
NEDD4-202ENST00000435532 CKS1BP61024 79 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
NEDD4-202ENST00000435532 PARD6GQ9BYG4 376 aaPredicted RBP12.55□□□□□ -0.4
NEDD4-202ENST00000435532 ZNRD1Q9P1U0 126 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 FABP2P12104 132 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 CFPP27918 469 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 F5H768 121 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 NDUFS7O75251 213 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 TMEM14BQ9NUH8 114 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 CBY1Q9Y3M2 126 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 C15orf62A8K5M9 175 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 H0YIZ8 118 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 IGHV4-59P01825 116 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
NEDD4-202ENST00000435532 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 FAM120AOSQ5T036 256 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 SH2D1AO60880 128 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 NTF4P34130 210 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 CARHSP1Q9Y2V2 147 aaKnown RBP12.54□□□□□ -0.4
NEDD4-202ENST00000435532 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 APOMO95445 188 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 IGKV3D-20A0A0C4DH25 116 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 DKK1O94907 266 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
NEDD4-202ENST00000435532 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 SEC11AP67812 179 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 LRRC75A-AS1Q8N1F1 130 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 XCL2Q9UBD3 114 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 A0A1W2PNU3 283 aaPredicted RBP12.53□□□□□ -0.4
NEDD4-202ENST00000435532 C22orf46C9J442 243 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 RHODO00212 210 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 NDUFA3O95167 84 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 RPLP1P05386 114 aaKnown RBP12.53□□□□□ -0.4
NEDD4-202ENST00000435532 RNF138Q8WVD3 245 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 HBDP02042 147 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 RNF182Q8N6D2 247 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 RMI2Q96E14 147 aa12.53□□□□□ -0.4
NEDD4-202ENST00000435532 LINC00205P59089 165 aa12.52□□□□□ -0.4
NEDD4-202ENST00000435532 FOXE3Q13461 319 aa12.52□□□□□ -0.4
NEDD4-202ENST00000435532 LINC01559Q495D7 138 aa12.52□□□□□ -0.4
NEDD4-202ENST00000435532 ARL6IP6Q8N6S5 226 aa12.52□□□□□ -0.4
NEDD4-202ENST00000435532 FREM3P0C091 2139 aa12.52□□□□□ -0.4
NEDD4-202ENST00000435532 KIF26BQ2KJY2 2108 aa12.52□□□□□ -0.4
NEDD4-202ENST00000435532 DOCK8Q8NF50 2099 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 CCL24O00175 119 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 IMMP2LQ96T52 175 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 C15orf65H3BRN8 121 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 ERCC8Q13216 396 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 OR11H6Q8NGC7 330 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 OCC1Q8TAD7 63 aa12.52□□□□□ -0.41
NEDD4-202ENST00000435532 VCYO14598 125 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms