RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZNF93P35789 620 aaPredicted RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 TFAMQ00059 246 aaKnown RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 EIF3IQ13347 325 aaKnown RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 PATE2Q6UY27 113 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 DEFB128Q7Z7B8 93 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 CANT1Q8WVQ1 401 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 POP5Q969H6 163 aaKnown RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 CCDC115Q96NT0 180 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 YPEL2Q96QA6 119 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 CACYBPQ9HB71 228 aaKnown RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 TAS2R7Q9NYW3 318 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 HELZ2Q9BYK8 2649 aaKnown RBP1.06□□□□□ -2.24
PTPN4-205ENST00000433888 MED12LQ86YW9 2145 aa1.06□□□□□ -2.24
PTPN4-205ENST00000433888 ZFC3H1O60293 1989 aaKnown RBP1.05□□□□□ -2.24
PTPN4-205ENST00000433888 TRBV6-8A0A0A6YYG3 113 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 TRDV1A0A1B0GX56 115 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 CCDC160A6NGH7 325 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 H3BQV1 296 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 M0QZK8 103 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 GGCTO75223 188 aaKnown RBP1.05□□□□□ -2.24
PTPN4-205ENST00000433888 CST7O76096 145 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 BRS3P32247 399 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 HBBP68871 147 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 SPANXN5Q5MJ07 72 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 PHF13Q86YI8 300 aaPredicted RBP1.05□□□□□ -2.24
PTPN4-205ENST00000433888 TMEM35BQ8NCS4 154 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 THEM6Q8WUY1 208 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 SFT2D1Q8WV19 159 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 DDA1Q9BW61 102 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 RNF122Q9H9V4 155 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 LRTM1Q9HBL6 345 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 BATF3Q9NR55 127 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 NUBP2Q9Y5Y2 271 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 UBR2Q8IWV8 1755 aa1.05□□□□□ -2.24
PTPN4-205ENST00000433888 SMARCA4P51532 1647 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 M0R233 179 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 OR1I1O60431 355 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 PROSCO94903 275 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 IGLV1-51P01701 117 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 NBEAP1P0C6P0 100 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 BAALC-AS2P0C853 105 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 MIFP14174 115 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 ROMO1P60602 79 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 CNBPP62633 177 aaKnown RBP1.04□□□□□ -2.24
PTPN4-205ENST00000433888 MYL5Q02045 173 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 KLRD1Q13241 179 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 TEX261Q6UWH6 196 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 Q8N2B8 174 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 NUP35Q8NFH5 326 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 RAB37Q96AX2 223 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 FKBP11Q9NYL4 201 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 GINS2Q9Y248 185 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 HS3ST2Q9Y278 367 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 U3KQ87 197 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 CD109Q6YHK3 1445 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 ARHGEF11O15085 1522 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 DISP1Q96F81 1524 aa1.04□□□□□ -2.24
PTPN4-205ENST00000433888 SBF1O95248 1867 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 ANKRD31Q8N7Z5 1873 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 A0A087WX48 190 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 TRAV12-1A0A0B4J245 112 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 TCRBV4S1A1TA0A5B7 111 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 PRORSD1PA6NEY8 169 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 OR2T8A6NH00 312 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 A8MWV9 139 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 E7EQ34 232 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 C5orf67F2Z3F1 127 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 ARPC5O15511 151 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 HIST1H2BKO60814 126 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 HIST1H2BJP06899 126 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 BCL2P10415 239 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 SDC2P34741 201 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 POLR2HP52434 150 aaKnown RBP1.03□□□□□ -2.24
PTPN4-205ENST00000433888 PLCXD2Q0VAA5 305 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 C10orf55Q5SWW7 151 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 TMEM14EPQ6UXP3 125 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 C4orf22Q6V702 233 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 PRR15Q8IV56 129 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 C10orf126Q8N4M7 172 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 Q8N814 137 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 OR5D16Q8NGK9 328 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 OR5D14Q8NGL3 314 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 Q8TAT8 98 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 BRK1Q8WUW1 75 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 NHP2Q9NX24 153 aaKnown RBP1.03□□□□□ -2.24
PTPN4-205ENST00000433888 OR5AC2Q9NZP5 309 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 MED31Q9Y3C7 131 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 LY96Q9Y6Y9 160 aa1.03□□□□□ -2.24
PTPN4-205ENST00000433888 YTHDC2Q9H6S0 1430 aaKnown RBP1.03□□□□□ -2.24
PTPN4-205ENST00000433888 TANC2Q9HCD6 1990 aa1.03□□□□□ -2.25
PTPN4-205ENST00000433888 FUOMA2VDF0 154 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 C19orf84I3L1E1 186 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 KLF7O75840 302 aaPredicted RBP1.02□□□□□ -2.25
PTPN4-205ENST00000433888 MT-ND4LP03901 98 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 RNASE3P12724 160 aaKnown RBP1.02□□□□□ -2.25
PTPN4-205ENST00000433888 COL4A5P29400 1685 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 SDC4P31431 198 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 CDK6Q00534 326 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 XIRP1Q702N8 1843 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms