RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CTSGP08311 255 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-203ENST00000431146 GPR183P32249 361 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 YPEL3P61236 119 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-203ENST00000431146 OR5I1Q13606 314 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 C1QL4Q86Z23 238 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 SFRP2Q96HF1 295 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 ZNF48Q96MX3 618 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-203ENST00000431146 RPH3ALQ9UNE2 315 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 PRRC2AP48634 2157 aaKnown RBP13□□□□□ -0.33
USHBP1-203ENST00000431146 TRAV34A0A0B4J273 112 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 A6NDX4 124 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 ADMP35318 185 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 GNG4P50150 75 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 LOXL1Q08397 574 aaPredicted RBP13□□□□□ -0.33
USHBP1-203ENST00000431146 Q6ZS46 218 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 Q96MF0 132 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 GAR1Q9NY12 217 aaKnown RBP13□□□□□ -0.33
USHBP1-203ENST00000431146 PGPA6NDG6 321 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 C9JCJ5 164 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 H3BRN7 92 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 J3QKU1 62 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 PFN1P07737 140 aaKnown RBP13□□□□□ -0.33
USHBP1-203ENST00000431146 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 BLCAPP62952 87 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 NHLRC2Q8NBF2 726 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 FAM210BQ96KR6 192 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 OR5B12Q96R08 314 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 ZNF586Q9NXT0 402 aa13□□□□□ -0.33
USHBP1-203ENST00000431146 CCDC168Q8NDH2 2452 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 SLC25A5P05141 298 aaKnown RBP12.99□□□□□ -0.33
USHBP1-203ENST00000431146 PRB4P10163 310 aaPredicted RBP12.99□□□□□ -0.33
USHBP1-203ENST00000431146 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
USHBP1-203ENST00000431146 MYCNOSP40205 109 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 DEFB112Q30KQ8 113 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 OR5R1Q8NH85 324 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 ZNF502Q8TBZ5 544 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 SGK494Q96LW2 274 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 ITPR3Q14573 2671 aa12.99□□□□□ -0.33
USHBP1-203ENST00000431146 PEX7O00628 323 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 CLEC3BP05452 202 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 FAM3BP58499 235 aaPredicted RBP12.98□□□□□ -0.33
USHBP1-203ENST00000431146 TEX38Q6PEX7 206 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 VN1R17PQ8TDU5 208 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 TLN2Q9Y4G6 2542 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 A0A1W2PPQ1 181 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 CCDC140Q96MF4 163 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 Q9H3A6 140 aa12.98□□□□□ -0.33
USHBP1-203ENST00000431146 A8MWP6 167 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 KRTAP1-3Q8IUG1 177 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 LRRC75A-AS1Q8N1F1 130 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 IGF2BP2-AS1Q96M15 143 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 TMEM208Q9BTX3 173 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 GNB4Q9HAV0 340 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 SLC17A3O00476 420 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 IGLV2-8P01709 118 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 IGHV4-59P01825 116 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 RBX1P62877 108 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 C19orf54Q5BKX5 351 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 CDPF1Q6NVV7 123 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 EXOC3-AS1Q8N2X6 119 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 EPDR1Q9UM22 224 aa12.97□□□□□ -0.33
USHBP1-203ENST00000431146 TRBV24-1A0A075B6N3 115 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 ISLRO14498 428 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 TRGC2P03986 189 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
USHBP1-203ENST00000431146 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
USHBP1-203ENST00000431146 CDKN1BP46527 198 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 CNN1P51911 297 aaKnown RBP12.96□□□□□ -0.33
USHBP1-203ENST00000431146 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 TXN2Q99757 166 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 TMEM14CQ9P0S9 112 aa12.96□□□□□ -0.33
USHBP1-203ENST00000431146 J3QLI3 93 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 CD99P14209 185 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 RNASE7Q9H1E1 156 aaKnown RBP12.95□□□□□ -0.34
USHBP1-203ENST00000431146 ITPR2Q14571 2701 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 ERVFC1-1P60608 527 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 MRPL52Q86TS9 123 aaKnown RBP12.95□□□□□ -0.34
USHBP1-203ENST00000431146 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 PITPNC1Q9UKF7 332 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 CDC42EP3Q9UKI2 254 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 LY96Q9Y6Y9 160 aa12.95□□□□□ -0.34
USHBP1-203ENST00000431146 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
USHBP1-203ENST00000431146 IGHG2P01859 326 aa12.94□□□□□ -0.34
USHBP1-203ENST00000431146 OR4F17Q8NGA8 305 aa12.94□□□□□ -0.34
USHBP1-203ENST00000431146 GCN1Q92616 2671 aaKnown RBP12.94□□□□□ -0.34
USHBP1-203ENST00000431146 PPP1R2P9O14990 202 aa12.94□□□□□ -0.34
USHBP1-203ENST00000431146 MRPS12O15235 138 aaKnown RBP12.94□□□□□ -0.34
USHBP1-203ENST00000431146 TRGV3P03979 118 aa12.94□□□□□ -0.34
USHBP1-203ENST00000431146 IGLC2P0DOY2 106 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms