RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PRO1854Q9UHT4 67 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 J3KT08 172 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 RPL35AP18077 110 aaKnown RBP13.62□□□□□ -0.23
RIF1-204ENST00000430328 MPZP25189 248 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 C1QL2Q7Z5L3 287 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 LINC01560Q8TB33 94 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 SPATA25Q9BR10 227 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 COLCA2A8K830 154 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 F6UB75 175 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 FAM166AQ6J272 317 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 ZNF501Q96CX3 271 aaPredicted RBP13.62□□□□□ -0.23
RIF1-204ENST00000430328 ARFGEF1Q9Y6D6 1849 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 SH2D1AO60880 128 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 BSPH1Q075Z2 132 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 ACACAQ13085 2346 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 A0A1W2PR77 199 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 CGB3P0DN86 165 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 ARAP2Q8WZ64 1704 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 CARD19Q96LW7 228 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 EREGO14944 169 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 RPL15P61313 204 aaKnown RBP13.61□□□□□ -0.23
RIF1-204ENST00000430328 AMN1Q8IY45 258 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 SCN7AQ01118 1682 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 TRPT1Q86TN4 253 aaKnown RBP13.61□□□□□ -0.23
RIF1-204ENST00000430328 MORN2Q502X0 79 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 PRR19A6NJB7 356 aa13.61□□□□□ -0.23
RIF1-204ENST00000430328 SMIM20Q8N5G0 67 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 FAM216BQ8N7L0 139 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 DEFB121Q5J5C9 76 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 C15orf53Q8NAA6 179 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 TMEM133Q9H2Q1 129 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 LINC01551Q86U37 167 aa13.6□□□□□ -0.23
RIF1-204ENST00000430328 PYY3Q5JQD4 70 aa13.59□□□□□ -0.23
RIF1-204ENST00000430328 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
RIF1-204ENST00000430328 HLA-DMBP28068 263 aa13.59□□□□□ -0.23
RIF1-204ENST00000430328 VSIRQ9H7M9 311 aa13.59□□□□□ -0.23
RIF1-204ENST00000430328 A0A1W2PPM0 123 aa13.59□□□□□ -0.23
RIF1-204ENST00000430328 C15orf32Q32M92 178 aa13.59□□□□□ -0.23
RIF1-204ENST00000430328 RHODO00212 210 aa13.58□□□□□ -0.23
RIF1-204ENST00000430328 FUSP35637 526 aaKnown RBP eCLIP13.58□□□□□ -0.24
RIF1-204ENST00000430328 SPSB3Q6PJ21 355 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 TRBV25-1A0A075B6N4 114 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 RS1O15537 224 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 ZNF497Q6ZNH5 498 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 LIMS2Q7Z4I7 341 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 TRBV6-7A0A0A0MS04 114 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 SMKR1H3BMG3 65 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 K7EP34 96 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 SLC25A28Q96A46 364 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 AGMATQ9BSE5 352 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 CECR9P0C854 216 aa13.58□□□□□ -0.24
RIF1-204ENST00000430328 A0A087WWL8 130 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 MED12LQ86YW9 2145 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 IGHV1-24A0A0C4DH33 117 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 A0A1B0GW64 132 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 PSME4Q14997 1843 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 LOC101059948A0A1B0GTJ6 334 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 ACYP1P07311 99 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 CEND1Q8N111 149 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 C11orf44Q8N8P7 122 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 CD24P25063 80 aa13.57□□□□□ -0.24
RIF1-204ENST00000430328 QSER1Q2KHR3 1735 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 TANC2Q9HCD6 1990 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 C22orf46C9J442 243 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 ATOX1O00244 68 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 FAM201AQ5SY85 155 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 MCRIP2Q9BUT9 160 aaKnown RBP13.56□□□□□ -0.24
RIF1-204ENST00000430328 SRSF8Q9BRL6 282 aaKnown RBP13.56□□□□□ -0.24
RIF1-204ENST00000430328 RGPD3A6NKT7 1758 aaPredicted RBP13.56□□□□□ -0.24
RIF1-204ENST00000430328 TRAV1-1A0A0B4J248 108 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 A0A1B0GWJ7 208 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 TRGV9Q99603 122 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 CLPSP04118 112 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 SPTSSBQ8NFR3 76 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 C17orf100A8MU93 164 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
RIF1-204ENST00000430328 SLC25A16P16260 332 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 FBLN5Q9UBX5 448 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 LY96Q9Y6Y9 160 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 H3BMG7 143 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 IFI6P09912 130 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 OR11H6Q8NGC7 330 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 FGF16O43320 207 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 A0A1B0GX51 115 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 SUPT4H1P63272 117 aaKnown RBP13.55□□□□□ -0.24
RIF1-204ENST00000430328 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 C1QTNF5Q9BXJ0 243 aa13.55□□□□□ -0.24
RIF1-204ENST00000430328 CDCP2Q5VXM1 449 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 BTAF1O14981 1849 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 CCL3L1P16619 93 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 IL17RELQ6ZVW7 336 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms