RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 YPEL3P61236 119 aaPredicted RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 LCN6P62502 163 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 GNG3P63215 75 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SEC11AP67812 179 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SMAGPQ0VAQ4 97 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 PSG5Q15238 335 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SPATA45Q537H7 98 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CT45A1Q5HYN5 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF322Q6U7Q0 402 aaPredicted RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SBSNQ6UWP8 590 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 DPPA3Q6W0C5 159 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 SMIM20Q8N5G0 67 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 ZIC4Q8N9L1 334 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM229BQ8NBD8 167 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 OR52R1Q8NGF1 315 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 OR51T1Q8NGJ9 327 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 OR10G9Q8NGN4 311 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 MFSD8Q8NHS3 518 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CT45A3Q8NHU0 189 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CMTM2Q8TAZ6 248 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 FNDC9Q8TBE3 224 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 AGMATQ9BSE5 352 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 DERL1Q9BUN8 251 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 DPY30Q9C005 99 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 BPESC1Q9GZL8 116 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 EIF5A2Q9GZV4 153 aaKnown RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM126AQ9H061 195 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 POLR2J3Q9H1A7 115 aaKnown RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 PROK2Q9HC23 129 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 ACER3Q9NUN7 267 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 FAM206AQ9NX38 181 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 HSPB8Q9UJY1 196 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 NOP16Q9Y3C1 178 aaKnown RBP2.95□□□□□ -1.94
HMGB3-203ENST00000430118 MPDZO75970 2070 aa2.95□□□□□ -1.94
HMGB3-203ENST00000430118 CMYA5Q8N3K9 4069 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TRAV9-1A0A075B6T8 112 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 CENPVL3A0A0U1RRI6 287 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 A6NDN8 102 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 RBFOX3A6NFN3 312 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 C17orf112F2Z3M2 114 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.94□□□□□ -1.94
HMGB3-203ENST00000430118 J3QRE1 110 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 M0QXV9 152 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 M0R1X1 148 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 NPIPB7O75200 414 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 ETHE1O95571 254 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 HBE1P02100 147 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 LINC00869P0C866 280 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 HIST1H1DP16402 221 aaKnown RBP2.94□□□□□ -1.94
HMGB3-203ENST00000430118 COX7A1P24310 79 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 S100A3P33764 101 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 VDAC2P45880 294 aaPredicted RBP2.94□□□□□ -1.94
HMGB3-203ENST00000430118 OR3A4PP47883 348 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TCL1AP56279 114 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TCTAP57738 103 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 PSG9Q00887 426 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 MEF2BQ02080 365 aaPredicted RBP2.94□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF266Q14584 549 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 OR7A5Q15622 319 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TIMM23BQ5SRD1 257 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM78Q5T7P6 136 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF429Q86V71 674 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 C14orf178Q8N769 122 aaPredicted RBP2.94□□□□□ -1.94
HMGB3-203ENST00000430118 OR9G1Q8NH87 305 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TYMSOSQ8TAI1 123 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 STAG3L4Q8TBR4 150 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 LGALS14Q8TCE9 139 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 RAB8BQ92930 207 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 S100A16Q96FQ6 103 aaKnown RBP2.94□□□□□ -1.94
HMGB3-203ENST00000430118 P2RX4Q99571 388 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TBX5Q99593 518 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 EFCAB11Q9BUY7 163 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 GTSF1LQ9H1H1 148 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 TMEM133Q9H2Q1 129 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 OR51I1Q9H343 314 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 NECAP2Q9NVZ3 263 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 NAT8BQ9UHF3 227 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 PCTPQ9UKL6 214 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
HMGB3-203ENST00000430118 EPPK1P58107 5090 aaKnown RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 FREM1Q5H8C1 2179 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 A0A087WUU8 490 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TRAV1-1A0A0B4J248 108 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 FAM168BA1KXE4 195 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 FAM231BA6NCW3 169 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 SMIM9A6NGZ8 99 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 OR4C45A6NMZ5 311 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 CEACAM18A8MTB9 384 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 ZNF727A8MUV8 499 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 M0R129 80 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 CDC42EP2O14613 210 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 TNFSF11O14788 317 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 DEGS1O15121 323 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 FCN3O75636 299 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 UTS2O95399 124 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 SFT2D2O95562 160 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 HRASP01112 189 aa2.93□□□□□ -1.94
HMGB3-203ENST00000430118 HLA-AP01891 365 aaKnown RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 DBIP07108 87 aaKnown RBP2.93□□□□□ -1.94
HMGB3-203ENST00000430118 MSMBP08118 114 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms