RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CCL1P22362 96 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 P2RY4P51582 365 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 PKIAP61925 76 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 CFHR3Q02985 330 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 PNRC1Q12796 327 aaPredicted RBP5.83□□□□□ -1.48
CNOT4-206ENST00000428680 SLAQ13239 276 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 FAM90A2PQ658T7 463 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 AQP10Q96PS8 301 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 KLHDC3Q9BQ90 382 aa5.83□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM250H0YL14 139 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 CKS1BP61024 79 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 FAM74A3Q4VXF1 159 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 F11RQ9Y624 299 aaKnown RBP5.82□□□□□ -1.48
CNOT4-206ENST00000428680 AKAP9Q99996 3911 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 GAGE12BA1L429 117 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 GAGE7O76087 117 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 IGHV2-70P01814 119 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 GAGE12FP0CL80 117 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 GAGE12GP0CL81 117 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 GAGE12IP0CL82 117 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 CNTFRP26992 372 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 NMUP48645 174 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 PDZD11Q5EBL8 140 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 TEX261Q6UWH6 196 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 TCEAL7Q9BRU2 100 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 ACANP16112 2415 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 DYSFO75923 2080 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 C5orf52A6NGY3 159 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 M0R2Z0 102 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 RPLP1P05386 114 aaKnown RBP5.82□□□□□ -1.48
CNOT4-206ENST00000428680 SPART-AS1P0CW21 52 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 HOXD3P31249 432 aaPredicted RBP5.82□□□□□ -1.48
CNOT4-206ENST00000428680 CDX1P47902 265 aaPredicted RBP5.82□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM95Q3KNT9 176 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 PRELID3AQ96N28 172 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 KAAG1Q9UBP8 84 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 BOD1L1Q8NFC6 3051 aa5.82□□□□□ -1.48
CNOT4-206ENST00000428680 IGHV3-73A0A0B4J1V6 119 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 APOMO95445 188 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 CCKARP32238 428 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 IQCJQ1A5X6 159 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 Q9H3A6 140 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 MUC21A0A0G2JKD1 596 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 MUC21A0A140T8X8 626 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 IER3P46695 156 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 FOXE3Q13461 319 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 DUX4L9Q6RFH8 374 aaPredicted RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 TBX15Q96SF7 602 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 SLIRPQ9GZT3 109 aaKnown RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM191AQ9H0A3 160 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 ALX4Q9H161 411 aaPredicted RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 ELF5Q9UKW6 265 aaPredicted RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 IGLV2-23P01705 113 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 LGALS1P09382 135 aaKnown RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 GCHFRP30047 84 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 PAX9P55771 341 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 Q6ZR03 302 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 C1orf159Q96HA4 380 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 CITED2Q99967 270 aaPredicted RBP5.81□□□□□ -1.48
CNOT4-206ENST00000428680 RFNGQ9Y644 331 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 IGKV1-12A0A0C4DH73 117 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 ZNF561-AS1K7EIQ3 104 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 IGKV1D-12P01611 117 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 RND3P61587 244 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM256Q8N2U0 113 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 TTC9CQ8N5M4 171 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 ANAPC16Q96DE5 110 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 COQ2Q96H96 371 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 LINC00477Q96M19 166 aa5.81□□□□□ -1.48
CNOT4-206ENST00000428680 VPS13AQ96RL7 3174 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 TGIF2-C20orf24A0A0A6YYL0 155 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 TRAV34A0A0B4J273 112 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 IGKV3D-20A0A0C4DH25 116 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 CENPVL3A0A0U1RRI6 287 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 IGLL5B9A064 214 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 APCSP02743 223 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 FOLR2P14207 255 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 PSG3Q16557 428 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM170BQ5T4T1 132 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 FER1L6-AS1Q8NA97 138 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 VN1R17PQ8TDU5 208 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 PAX4O43316 350 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 BLCAPP62952 87 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 IRF3Q14653 427 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 ZNF79Q15937 498 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 VWC2Q2TAL6 325 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 SRSF8Q9BRL6 282 aaKnown RBP5.8□□□□□ -1.48
CNOT4-206ENST00000428680 Q9HAA7 133 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 OTORQ9NRC9 128 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 HSPB8Q9UJY1 196 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 SHISA3A0PJX4 238 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 COX6CP09669 75 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 IFI27P40305 119 aaPredicted RBP5.8□□□□□ -1.48
CNOT4-206ENST00000428680 NHLRC3Q5JS37 347 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 TMEM70Q9BUB7 260 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
CNOT4-206ENST00000428680 IGKV1D-13A0A0B4J2D9 117 aa5.79□□□□□ -1.48
CNOT4-206ENST00000428680 FAM74A7A6NL05 159 aa5.79□□□□□ -1.48
CNOT4-206ENST00000428680 SLC25A20O43772 301 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms