RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
PTPRU-204ENST00000428026 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
PTPRU-204ENST00000428026 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 ZNF474Q6S9Z5 364 aaPredicted RBP11.87□□□□□ -0.51
PTPRU-204ENST00000428026 NBL1P41271 181 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
PTPRU-204ENST00000428026 LINC00158P58513 81 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 C2orf82Q6UX34 121 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 GATD1Q8NB37 220 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 TICRRQ7Z2Z1 1910 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 IGHV1-18A0A0C4DH31 117 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 LINC00473A8K010 186 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 RASL11AQ6T310 242 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 TMEM158Q8WZ71 300 aa11.87□□□□□ -0.51
PTPRU-204ENST00000428026 SSBP2P81877 361 aaPredicted RBP11.86□□□□□ -0.51
PTPRU-204ENST00000428026 NEU4Q8WWR8 484 aaPredicted RBP11.86□□□□□ -0.51
PTPRU-204ENST00000428026 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 RPUSD1Q9UJJ7 312 aaKnown RBP11.86□□□□□ -0.51
PTPRU-204ENST00000428026 DOPEY2Q9Y3R5 2298 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 CD5LO43866 347 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 QRFPP83859 136 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 Q6ZRM9 215 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 PEMTQ9UBM1 199 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 SH2D1AO60880 128 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 COLCA1Q6ZS62 124 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
PTPRU-204ENST00000428026 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 STHQ8IWL8 128 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
PTPRU-204ENST00000428026 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 MLANAQ16655 118 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
PTPRU-204ENST00000428026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.85□□□□□ -0.51
PTPRU-204ENST00000428026 LYL1P12980 280 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
PTPRU-204ENST00000428026 IGLV3-32A0A0A0MS00 114 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 LILRA1O75019 489 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 SRSF7Q16629 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPRU-204ENST00000428026 MYO7BQ6PIF6 2116 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 CRPP02741 224 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 FAM168AQ92567 244 aa11.85□□□□□ -0.51
PTPRU-204ENST00000428026 PNRC2Q9NPJ4 139 aaKnown RBP11.85□□□□□ -0.51
PTPRU-204ENST00000428026 IGHV2-70P01814 119 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 TANC1Q9C0D5 1861 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 TRAV8-3A0A0A6YYJ7 113 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
PTPRU-204ENST00000428026 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
PTPRU-204ENST00000428026 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.84□□□□□ -0.51
PTPRU-204ENST00000428026 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
PTPRU-204ENST00000428026 TRGV4A0A0C4DH28 118 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 TCF15Q12870 199 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 TMEM86BQ8N661 226 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 CITED1Q99966 193 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 LY6G6EA0A0G2JKS1 128 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 C9JAW5 83 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
PTPRU-204ENST00000428026 PAX8Q06710 450 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 LY96Q9Y6Y9 160 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 U3KQA8 63 aa11.83□□□□□ -0.52
PTPRU-204ENST00000428026 S100A7L2Q5SY68 101 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 C14orf178Q8N769 122 aaPredicted RBP11.82□□□□□ -0.52
PTPRU-204ENST00000428026 GBF1Q92538 1859 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 ADARB2-AS1A8MUL3 147 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 NDPQ00604 133 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 C20orf144Q9BQM9 153 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 K7ENP7 123 aa11.82□□□□□ -0.52
PTPRU-204ENST00000428026 C15orf32Q32M92 178 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
PTPRU-204ENST00000428026 C20orf204Q6ZNR8 217 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 GGNQ86UU5 652 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 ARTNQ5T4W7 220 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 NOTCH4Q99466 2003 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 ZNF329Q86UD4 541 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 LRRK1Q38SD2 2015 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 TRGV11A0A075B6L2 103 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 PFN1P07737 140 aaKnown RBP11.81□□□□□ -0.52
PTPRU-204ENST00000428026 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 ABCA1O95477 2261 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 A0A1B0GWJ7 208 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 PAX4O43316 350 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 PRSS57Q6UWY2 283 aa11.81□□□□□ -0.52
PTPRU-204ENST00000428026 OVOL1O14753 267 aa11.8□□□□□ -0.52
PTPRU-204ENST00000428026 TMEM200BQ69YZ2 307 aa11.8□□□□□ -0.52
PTPRU-204ENST00000428026 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
PTPRU-204ENST00000428026 IGHV2-26A0A0B4J1V2 119 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms