RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 IGFL4Q6B9Z1 124 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 CLUHP3Q96NS8 147 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 UHRF2Q96PU4 802 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-202ENST00000427943 MGAT4CQ9UBM8 478 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 HIGD1AQ9Y241 93 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 TSC22D2O75157 780 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 MBPP02686 304 aaPredicted RBP13.22□□□□□ -0.29
PSPC1-202ENST00000427943 TCRBP04435 133 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 OR5G3P0C626 314 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 EMP1P54849 157 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 TCTAP57738 103 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 PRR20EP86478 221 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 PRR20CP86479 221 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 PRR20DP86480 221 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 PRR20BP86481 221 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 PRR20AP86496 221 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 PSG9Q00887 426 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 SLC38A11Q08AI6 406 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 C12orf74Q32Q52 190 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 RNF182Q8N6D2 247 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 OR10P1Q8NGE3 313 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 GPR82Q96P67 336 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 SEC22CQ9BRL7 303 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 SHANK2-AS3Q9BTD1 123 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 NUDT15Q9NV35 164 aa13.22□□□□□ -0.29
PSPC1-202ENST00000427943 IGHV4-4A0A075B6R2 117 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 HYPMO75409 117 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 S100A7P31151 101 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 TAS2R30P59541 319 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 ARL16Q0P5N6 197 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 NEU1Q99519 415 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 NPVFQ9HCQ7 196 aa13.21□□□□□ -0.29
PSPC1-202ENST00000427943 TRAV8-2A0A0B4J237 113 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 C7orf66A4D0T2 115 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 FAM25EA8MYX2 175 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 PLP1P60201 277 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 SELENOTP62341 195 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 ZNF846Q147U1 533 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
PSPC1-202ENST00000427943 LSM5Q9Y4Y9 91 aaKnown RBP13.2□□□□□ -0.3
PSPC1-202ENST00000427943 FRAS1Q86XX4 4008 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 DEFB131BA0A096LNP1 70 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 FNDC10F2Z333 226 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 ZNF431Q8TF32 576 aaPredicted RBP13.19□□□□□ -0.3
PSPC1-202ENST00000427943 GOLT1BQ9Y3E0 138 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
PSPC1-202ENST00000427943 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 A8MTW9 85 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 L7N2F9 121 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
PSPC1-202ENST00000427943 VAMP2P63027 116 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 AMTNQ6UX39 209 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 CCDC32Q9BV29 185 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
PSPC1-202ENST00000427943 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
PSPC1-202ENST00000427943 C5orf51A6NDU8 294 aa13.17□□□□□ -0.3
PSPC1-202ENST00000427943 K7EPK0 472 aa13.17□□□□□ -0.3
PSPC1-202ENST00000427943 AGPAT2O15120 278 aa13.17□□□□□ -0.3
PSPC1-202ENST00000427943 SPART-AS1P0CW21 52 aa13.17□□□□□ -0.3
PSPC1-202ENST00000427943 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
PSPC1-202ENST00000427943 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
PSPC1-202ENST00000427943 RNF126Q9BV68 326 aa13.17□□□□□ -0.3
PSPC1-202ENST00000427943 M0R2Z0 102 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 GOSR2O14653 212 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 HBE1P02100 147 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 AMBPP02760 352 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 BCAP31P51572 246 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 SPINK13Q1W4C9 94 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
PSPC1-202ENST00000427943 OR11H7Q8NGC8 314 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 MGST2Q99735 147 aa13.16□□□□□ -0.3
PSPC1-202ENST00000427943 A0A087X0K7 114 aa13.15□□□□□ -0.3
PSPC1-202ENST00000427943 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
PSPC1-202ENST00000427943 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
PSPC1-202ENST00000427943 CAV2P51636 162 aa13.15□□□□□ -0.3
PSPC1-202ENST00000427943 IGF2BP2-AS1Q96M15 143 aa13.15□□□□□ -0.3
PSPC1-202ENST00000427943 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
PSPC1-202ENST00000427943 DKK2Q9UBU2 259 aa13.15□□□□□ -0.3
PSPC1-202ENST00000427943 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 CST7O76096 145 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
PSPC1-202ENST00000427943 CXCL3P19876 107 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 S100A10P60903 97 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
PSPC1-202ENST00000427943 RRN3P1Q2M238 152 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 BAP18Q8IXM2 172 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 LRRC20Q8TCA0 184 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 C11orf1Q9H5F2 150 aa13.14□□□□□ -0.31
PSPC1-202ENST00000427943 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms