RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CHRDL1Q9BU40 450 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 GRIFINA4D1Z8 144 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 LINC01548A6NM66 108 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 C15orf32Q32M92 178 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 SIGLEC15Q6ZMC9 328 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 Q86TA4 180 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
APOBEC3D-202ENST00000427494 ACACBO00763 2458 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 TRAV8-1A0A0A6YYK1 113 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 A0A1B0GUS0 222 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 G3V318 75 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 AMY1AP04745 511 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 RHOGP84095 191 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 COX19Q49B96 90 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 ZNF502Q8TBZ5 544 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 BBC3Q96PG8 261 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 NAT8BQ9UHF3 227 aa10.93□□□□□ -0.66
APOBEC3D-202ENST00000427494 MT-ND6P03923 174 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 IGHV4-38-2P0DP08 117 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 GPR183P32249 361 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 RAB4BP61018 213 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 CDPF1Q6NVV7 123 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 TMEM136Q6ZRR5 245 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 GBGT1Q8N5D6 347 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 NRGNQ92686 78 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 MSMBP08118 114 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 KLK9Q2XQG4 91 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 PRNTQ86SH4 94 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 TMEM256Q8N2U0 113 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 RABAC1Q9UI14 185 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 KLK9Q9UKQ9 250 aa10.92□□□□□ -0.66
APOBEC3D-202ENST00000427494 DOPEY1Q5JWR5 2465 aa10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 CRISP2P16562 243 aa10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 LINC00322Q6ZN03 302 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 PIFOQ8TCI5 191 aa10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 TSKUQ8WUA8 353 aa10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 ZNF331Q9NQX6 463 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 ZNF492Q9P255 531 aa10.91□□□□□ -0.66
APOBEC3D-202ENST00000427494 CACNA1BQ00975 2339 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 IGHV3-35A0A0C4DH35 117 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 MS4A10Q96PG2 267 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 NEU1Q99519 415 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 MEGF9Q9H1U4 602 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 C19orf71A6NCJ1 209 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 K7EQM0 130 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 BMPR1BO00238 502 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 P01737 135 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 PDE6HQ13956 83 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 CIARTQ8N365 385 aaPredicted RBP10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 TMEM75Q8N9X5 138 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 GNB4Q9HAV0 340 aa10.9□□□□□ -0.66
APOBEC3D-202ENST00000427494 SPTAN1Q13813 2472 aaKnown RBP10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 HIGD1CA8MV81 97 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 NUPR1O60356 82 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 CLEC3BP05452 202 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 COX6B1P14854 86 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 EEF1AKMT3Q96AZ1 226 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 CCDC140Q96MF4 163 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 PRSS22Q9GZN4 317 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 SOX21Q9Y651 276 aaPredicted RBP10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
APOBEC3D-202ENST00000427494 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 DSCR9P59020 149 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 KIAA1644Q3SXP7 199 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 C9orf152Q5JTZ5 239 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 CLEC19AQ6UXS0 136 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 Q71RC1 249 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 ZNF843Q8N446 348 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 WIPF2Q8TF74 440 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 HIF1ANQ9NWT6 349 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 CSMD1Q96PZ7 3565 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 FLNCQ14315 2725 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 TRAV41A0A0B4J266 112 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 M0R3E3 92 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 S100A7P31151 101 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 PSG9Q00887 426 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 LY6EQ16553 131 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 PSG3Q16557 428 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 CT83Q5H943 113 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 DNLZQ5SXM8 178 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 RASL11AQ6T310 242 aa10.88□□□□□ -0.67
APOBEC3D-202ENST00000427494 TCF24Q7RTU0 167 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms