RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-202ENST00000426778 SNAI2O43623 268 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 CNIH1O95406 144 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 FXYD7P58549 80 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 TMEM30BQ3MIR4 351 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 FAM120AOSQ5T036 256 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 SRSF12Q8WXF0 261 aaKnown RBP11.42□□□□□ -0.58
ERCC3-202ENST00000426778 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-202ENST00000426778 NCOR2Q9Y618 2525 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 A8MWL6 223 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 LTAP01374 205 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 CRYGCP07315 174 aa11.42□□□□□ -0.58
ERCC3-202ENST00000426778 GRNP28799 593 aaKnown RBP11.42□□□□□ -0.58
ERCC3-202ENST00000426778 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 MC5RP33032 325 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 TRGV9Q99603 122 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 INS-IGF2F8WCM5 200 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 CCL25O15444 150 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 TOMM40O96008 361 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 ARMS2P0C7Q2 107 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 C8orf46Q8TAG6 207 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 TMEM70Q9BUB7 260 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 ONECUT1Q9UBC0 465 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 KLF12Q9Y4X4 402 aa11.41□□□□□ -0.58
ERCC3-202ENST00000426778 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 OR2J3O76001 311 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 LGALS7P47929 136 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 KLF5Q13887 457 aaPredicted RBP11.4□□□□□ -0.58
ERCC3-202ENST00000426778 ETFRF1Q6IPR1 90 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 Q86TA4 180 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 LINC00311Q8N616 119 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 RPEQ96AT9 228 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 RASL11BQ9BPW5 248 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 ZNF785A8K8V0 405 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 FOXE3Q13461 319 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 Q8NA96 180 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 ZC2HC1AQ96GY0 325 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 F11RQ9Y624 299 aaKnown RBP11.4□□□□□ -0.58
ERCC3-202ENST00000426778 SELENOKQ9Y6D0 94 aa11.4□□□□□ -0.58
ERCC3-202ENST00000426778 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 TMUB1Q9BVT8 246 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 IGKV1-17P01599 117 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 IGLV2-11P01706 119 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 KLRD1Q13241 179 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 MPV17L2Q567V2 206 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 RBPMS2Q6ZRY4 209 aaKnown RBP11.39□□□□□ -0.59
ERCC3-202ENST00000426778 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 FMC1Q96HJ9 113 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.39□□□□□ -0.59
ERCC3-202ENST00000426778 PTTG1IPP53801 180 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 GAGE1Q13065 139 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
ERCC3-202ENST00000426778 LOC389332A0A1B0GUA5 103 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 TIMM23O14925 209 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 IGLV1-47P01700 117 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 HTR1DP28221 377 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 ARF6P62330 175 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 TEX45Q8NA69 505 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 CHRDL1Q9BU40 450 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 PPIAL4CA0A0B4J2A2 164 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 IL4P05112 153 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 LINC00614P0C842 121 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
ERCC3-202ENST00000426778 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
ERCC3-202ENST00000426778 LOC102724200A0A096LPH7 203 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-202ENST00000426778 C20orf202A1L168 122 aa11.37□□□□□ -0.59
ERCC3-202ENST00000426778 FAM90A27PA6NNH2 459 aa11.37□□□□□ -0.59
ERCC3-202ENST00000426778 CRYGBP07316 175 aa11.37□□□□□ -0.59
ERCC3-202ENST00000426778 ATP5L2Q7Z4Y8 100 aa11.37□□□□□ -0.59
ERCC3-202ENST00000426778 HES1Q14469 280 aa11.37□□□□□ -0.59
ERCC3-202ENST00000426778 MRPL52Q86TS9 123 aaKnown RBP11.37□□□□□ -0.59
ERCC3-202ENST00000426778 I3L2K1 104 aa11.36□□□□□ -0.59
ERCC3-202ENST00000426778 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
ERCC3-202ENST00000426778 ASCL5Q7RTU5 278 aa11.36□□□□□ -0.59
ERCC3-202ENST00000426778 CRIP1P50238 77 aa11.36□□□□□ -0.59
ERCC3-202ENST00000426778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
ERCC3-202ENST00000426778 K7EIM0 57 aa11.35□□□□□ -0.59
ERCC3-202ENST00000426778 NUDT3O95989 172 aa11.35□□□□□ -0.59
ERCC3-202ENST00000426778 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-202ENST00000426778 FAM71F2Q6NXP2 309 aa11.35□□□□□ -0.59
ERCC3-202ENST00000426778 RBM14Q96PK6 669 aaKnown RBP11.35□□□□□ -0.59
ERCC3-202ENST00000426778 NCR2O95944 276 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms