RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 JMJD8Q96S16 334 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 MGST2Q99735 147 aa12.98□□□□□ -0.33
PKP4-205ENST00000426248 CD177Q8N6Q3 437 aa12.97□□□□□ -0.33
PKP4-205ENST00000426248 S1PR3Q99500 378 aa12.97□□□□□ -0.33
PKP4-205ENST00000426248 RABAC1Q9UI14 185 aa12.97□□□□□ -0.33
PKP4-205ENST00000426248 MPDU1O75352 247 aa12.97□□□□□ -0.33
PKP4-205ENST00000426248 SMIM13P0DJ93 91 aa12.97□□□□□ -0.33
PKP4-205ENST00000426248 IGHV1-24A0A0C4DH33 117 aa12.96□□□□□ -0.33
PKP4-205ENST00000426248 H3BTX0 84 aa12.96□□□□□ -0.33
PKP4-205ENST00000426248 ZNF146Q15072 292 aa12.96□□□□□ -0.33
PKP4-205ENST00000426248 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.33
PKP4-205ENST00000426248 CD300EQ496F6 205 aaPredicted RBP12.96□□□□□ -0.33
PKP4-205ENST00000426248 WFDC3Q8IUB2 231 aa12.96□□□□□ -0.33
PKP4-205ENST00000426248 Q6P435 159 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 Q6ZSR3 168 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 NUP37Q8NFH4 326 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 TMEM140Q9NV12 185 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 CALYQ9NYX4 217 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 C15orf62A8K5M9 175 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 H3BRM9 83 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 CSN1S1P47710 185 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 IGHV3-35A0A0C4DH35 117 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 FXYD7P58549 80 aa12.95□□□□□ -0.34
PKP4-205ENST00000426248 HBBP68871 147 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 SLC35E4Q6ICL7 350 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 SH2D6Q7Z4S9 175 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 NHP2Q9NX24 153 aaKnown RBP12.94□□□□□ -0.34
PKP4-205ENST00000426248 A0A1W2PPM0 123 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 SCGB2A1O75556 95 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 ZNF497Q6ZNH5 498 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 NABP2Q9BQ15 211 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
PKP4-205ENST00000426248 IGKV1D-17A0A075B6S4 117 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 C19orf24Q9BVV8 132 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 SCRT2Q9NQ03 307 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 AMMECR1Q9Y4X0 333 aaPredicted RBP12.94□□□□□ -0.34
PKP4-205ENST00000426248 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 A0A1B0GWB2 263 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 SLC25A5P05141 298 aaKnown RBP12.94□□□□□ -0.34
PKP4-205ENST00000426248 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
PKP4-205ENST00000426248 J3QR06 171 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 SLC25A17O43808 307 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 DUX4L9Q6RFH8 374 aaPredicted RBP12.93□□□□□ -0.34
PKP4-205ENST00000426248 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 MS4A6AQ9H2W1 248 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 J3KRW8 73 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 F2RL2O00254 374 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 CCL3L1P16619 93 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 AP5S1Q9NUS5 200 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 ATMQ13315 3056 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 A8MWL6 223 aa12.93□□□□□ -0.34
PKP4-205ENST00000426248 APOHP02749 345 aaPredicted RBP12.93□□□□□ -0.34
PKP4-205ENST00000426248 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 K7ERJ3 54 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 P01737 135 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 DCHS1Q96JQ0 3298 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 K7EMI3 77 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 ORM2P19652 201 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 C11orf53Q8IXP5 236 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 ARPC1AQ92747 370 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 COX8AP10176 69 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 CDSNQ15517 529 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 ZNF714Q96N38 554 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 SSUH2Q9Y2M2 353 aa12.92□□□□□ -0.34
PKP4-205ENST00000426248 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 SFTA2Q6UW10 78 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 COQ2Q96H96 371 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 MOB3BQ86TA1 216 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 MRAP2Q96G30 205 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 CENPEQ02224 2701 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 ERVK11-1P61568 191 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
PKP4-205ENST00000426248 LAMA5O15230 3695 aa12.91□□□□□ -0.34
PKP4-205ENST00000426248 GNG5P63218 68 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 SHISA9B4DS77 424 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 COX6B1P14854 86 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 FCGR2BP31994 310 aaPredicted RBP12.9□□□□□ -0.34
PKP4-205ENST00000426248 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 POLQO75417 2590 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
PKP4-205ENST00000426248 CLEC3BP05452 202 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 CACNG7P62955 275 aa12.9□□□□□ -0.34
PKP4-205ENST00000426248 COX7A2P2O60397 106 aa12.9□□□□□ -0.35
PKP4-205ENST00000426248 SPINK8P0C7L1 97 aa12.9□□□□□ -0.35
PKP4-205ENST00000426248 WFDC2Q14508 124 aa12.9□□□□□ -0.35
PKP4-205ENST00000426248 CCDC144NLQ6NUI1 221 aa12.9□□□□□ -0.35
PKP4-205ENST00000426248 ANAPC13Q9BS18 74 aa12.9□□□□□ -0.35
PKP4-205ENST00000426248 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 SMIM17P0DL12 118 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 RPL39P5Q59GN2 51 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 TMEM178BH3BS89 294 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 CT45A6P0DMU7 189 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 CT45A5P0DMU8 189 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 CT45A7P0DMV0 189 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 PPIFP30405 207 aaKnown RBP12.89□□□□□ -0.35
PKP4-205ENST00000426248 CT45A1Q5HYN5 189 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms