RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 IGHV7-4-1A0A0J9YVY3 117 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 MAP1LC3B2A6NCE7 125 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 IZUMO1RA6ND01 250 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 CRYBB3P26998 211 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 RHOBP62745 196 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 PFDN5Q99471 154 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 MAP1LC3BQ9GZQ8 125 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 H3BQ15 152 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 CHEK1O14757 476 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 SAP30O75446 220 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 UBE2G2P60604 165 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 RNF141Q8WVD5 230 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 PHYHIPLQ96FC7 376 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 ACTR3CQ9C0K3 210 aaPredicted RBP10.18□□□□□ -0.78
PRPF39-202ENST00000424478 SMAD5-AS1Q9Y6J3 95 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 ELOA3CA0A087WX78 387 aaPredicted RBP10.17□□□□□ -0.78
PRPF39-202ENST00000424478 CSN3P07498 182 aa10.17□□□□□ -0.78
PRPF39-202ENST00000424478 NMBP08949 121 aa10.17□□□□□ -0.78
PRPF39-202ENST00000424478 H2AFB1P0C5Y9 115 aa10.17□□□□□ -0.78
PRPF39-202ENST00000424478 SMPXQ9UHP9 88 aa10.17□□□□□ -0.78
PRPF39-202ENST00000424478 UFC1Q9Y3C8 167 aa10.17□□□□□ -0.78
PRPF39-202ENST00000424478 MYCNOSP40205 109 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 DEFB1P60022 68 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 OR4F17Q8NGA8 305 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 OR4F4Q96R69 305 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 UMAD1C9J7I0 102 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 SLC17A3O00476 420 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 C8orf88P0DMB2 117 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 HLA-DMBP28068 263 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 REC114Q7Z4M0 266 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 CTXND1A0A1B0GTU2 59 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 MBP02144 154 aa10.16□□□□□ -0.78
PRPF39-202ENST00000424478 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
PRPF39-202ENST00000424478 A8MWP6 167 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 SEC14L6B5MCN3 397 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 GP9P14770 177 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 IGLL1P15814 213 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 UBE2L3P68036 154 aaKnown RBP10.15□□□□□ -0.78
PRPF39-202ENST00000424478 STXBP6Q8NFX7 210 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 U3KQE9 123 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 LGALS9O00182 355 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 STAG3L2P0CL84 134 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 STAG3L3P0CL85 134 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 CD300EQ496F6 205 aaPredicted RBP10.15□□□□□ -0.78
PRPF39-202ENST00000424478 TCF24Q7RTU0 167 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 PAXXQ9BUH6 204 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 ZNF586Q9NXT0 402 aa10.15□□□□□ -0.78
PRPF39-202ENST00000424478 AGRNO00468 2067 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 TMEM61Q8N0U2 210 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 DYNLRB2Q8TF09 96 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 OR51M1Q9H341 326 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 FAM24BQ8N5W8 94 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 FXYD5Q96DB9 178 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 GNG13Q9P2W3 67 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF785A8K8V0 405 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 MRPS12O15235 138 aaKnown RBP10.14□□□□□ -0.79
PRPF39-202ENST00000424478 GCHFRP30047 84 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 HAGHQ16775 308 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 OXLD1Q5BKU9 147 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 SIGLEC15Q6ZMC9 328 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 EXOC3-AS1Q8N2X6 119 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
PRPF39-202ENST00000424478 CD33P20138 364 aa10.13□□□□□ -0.79
PRPF39-202ENST00000424478 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
PRPF39-202ENST00000424478 TMEM231Q9H6L2 316 aa10.13□□□□□ -0.79
PRPF39-202ENST00000424478 K7EMT4 169 aa10.13□□□□□ -0.79
PRPF39-202ENST00000424478 RARRES2Q99969 163 aa10.13□□□□□ -0.79
PRPF39-202ENST00000424478 MRPL32Q9BYC8 188 aaKnown RBP10.13□□□□□ -0.79
PRPF39-202ENST00000424478 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
PRPF39-202ENST00000424478 BPIFA4PQ86YQ2 179 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 YTHDF2Q9Y5A9 579 aaKnown RBP10.12□□□□□ -0.79
PRPF39-202ENST00000424478 KHDC3LQ587J8 217 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF767PQ75MW2 155 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 NARS2Q96I59 477 aaKnown RBP10.12□□□□□ -0.79
PRPF39-202ENST00000424478 ASCL2Q99929 193 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 RPH3ALQ9UNE2 315 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 M0QZ24 198 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 RAB5CP51148 216 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 RIPPLY3P57055 190 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF124Q15973 351 aa10.12□□□□□ -0.79
PRPF39-202ENST00000424478 M0R3E3 92 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 NBEAP1P0C6P0 100 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 TAS2R45P59539 299 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 GUCA2BQ16661 112 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 DEFB114Q30KQ6 69 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 MBD3L1Q8WWY6 194 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 ZNF705FA8MVS1 300 aaPredicted RBP10.11□□□□□ -0.79
PRPF39-202ENST00000424478 PAGE4O60829 102 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 CXorf1O96002 111 aa10.11□□□□□ -0.79
PRPF39-202ENST00000424478 ATF4P18848 351 aaPredicted RBP10.11□□□□□ -0.79
PRPF39-202ENST00000424478 ATP5G3P48201 142 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms