RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 LEMD1Q68G75 181 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 Q6ZRG5 221 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 OR2T35Q8NGX2 323 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 WFDC1Q9HC57 220 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 RNF24Q9Y225 148 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 PXMP4Q9Y6I8 212 aa13.64□□□□□ -0.23
HDAC6-205ENST00000423941 LOC102724200A0A096LPH7 203 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-205ENST00000423941 GALR1P47211 349 aa13.63□□□□□ -0.23
HDAC6-205ENST00000423941 B2MP61769 119 aa13.63□□□□□ -0.23
HDAC6-205ENST00000423941 MORN5Q5VZ52 161 aa13.63□□□□□ -0.23
HDAC6-205ENST00000423941 Q6ZNX1 250 aa13.63□□□□□ -0.23
HDAC6-205ENST00000423941 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
HDAC6-205ENST00000423941 SLC25A22Q9H936 323 aa13.63□□□□□ -0.23
HDAC6-205ENST00000423941 KIR2DL5BA0A0G2JN68 375 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 KIR2DL5BA0A0G2JPC4 375 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 ZNF688P0C7X2 276 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 RPL7P18124 248 aaKnown RBP13.62□□□□□ -0.23
HDAC6-205ENST00000423941 MEOX2P50222 304 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 KIR2DL5AQ8N109 375 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 KIR2DL5BQ8NHK3 375 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 TNFSF18Q9UNG2 199 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 AGRNO00468 2067 aa13.62□□□□□ -0.23
HDAC6-205ENST00000423941 NBEAL2Q6ZNJ1 2754 aa13.61□□□□□ -0.23
HDAC6-205ENST00000423941 A0A087X0K7 114 aa13.61□□□□□ -0.23
HDAC6-205ENST00000423941 RNF222A6NCQ9 220 aa13.61□□□□□ -0.23
HDAC6-205ENST00000423941 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
HDAC6-205ENST00000423941 PFDN5Q99471 154 aa13.61□□□□□ -0.23
HDAC6-205ENST00000423941 RSG1Q9BU20 258 aa13.61□□□□□ -0.23
HDAC6-205ENST00000423941 ISLRO14498 428 aa13.6□□□□□ -0.23
HDAC6-205ENST00000423941 PSMB3P49720 205 aa13.6□□□□□ -0.23
HDAC6-205ENST00000423941 SNRPD3P62318 126 aaKnown RBP13.6□□□□□ -0.23
HDAC6-205ENST00000423941 SAMD13Q5VXD3 122 aa13.6□□□□□ -0.23
HDAC6-205ENST00000423941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.6□□□□□ -0.23
HDAC6-205ENST00000423941 SMIM3Q9BZL3 60 aa13.6□□□□□ -0.23
HDAC6-205ENST00000423941 TENM3Q9P273 2699 aa13.6□□□□□ -0.23
HDAC6-205ENST00000423941 IFNA5P01569 189 aa13.59□□□□□ -0.23
HDAC6-205ENST00000423941 KCNIP2Q9NS61 270 aa13.59□□□□□ -0.23
HDAC6-205ENST00000423941 U3KQK5 164 aa13.59□□□□□ -0.23
HDAC6-205ENST00000423941 UBE2CO00762 179 aa13.58□□□□□ -0.24
HDAC6-205ENST00000423941 ID1P41134 155 aa13.58□□□□□ -0.24
HDAC6-205ENST00000423941 PSMG4Q5JS54 123 aa13.58□□□□□ -0.24
HDAC6-205ENST00000423941 TRPT1Q86TN4 253 aaKnown RBP13.58□□□□□ -0.24
HDAC6-205ENST00000423941 ZNF709Q8N972 641 aa13.58□□□□□ -0.24
HDAC6-205ENST00000423941 SPATA25Q9BR10 227 aa13.58□□□□□ -0.24
HDAC6-205ENST00000423941 ZMAT4Q9H898 229 aa13.58□□□□□ -0.24
HDAC6-205ENST00000423941 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 C17orf112F2Z3M2 114 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 APOC4P55056 127 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 GCSAMLQ5JQS6 135 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 Q6ZWC4 215 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 BPIFA4PQ86YQ2 179 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 RCHY1Q96PM5 261 aa13.57□□□□□ -0.24
HDAC6-205ENST00000423941 HUWE1Q7Z6Z7 4374 aaKnown RBP13.56□□□□□ -0.24
HDAC6-205ENST00000423941 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 IGLC2P0DOY2 106 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 INO80EQ8NBZ0 244 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-205ENST00000423941 C20orf173Q96LM9 149 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 CLUHP3Q96NS8 147 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 CSTL1Q9H114 145 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 HRH4Q9H3N8 390 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 TMEM14CQ9P0S9 112 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 TIMM9Q9Y5J7 89 aa13.56□□□□□ -0.24
HDAC6-205ENST00000423941 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 H3BMM0 161 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 RPL35AP18077 110 aaKnown RBP13.55□□□□□ -0.24
HDAC6-205ENST00000423941 ATF4P18848 351 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-205ENST00000423941 CXCL2P19875 107 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 ZNF266Q14584 549 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 SAT2Q96F10 170 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-205ENST00000423941 FAM167A-AS1Q96KT0 104 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 C16orf92Q96LL3 132 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
HDAC6-205ENST00000423941 A8MTW9 85 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 H3BQ15 152 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 GIG44P09565 113 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-205ENST00000423941 FAM78BQ5VT40 261 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 STHQ8IWL8 128 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 OR11H4Q8NGC9 324 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 ST6GAL2Q96JF0 529 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 OVOL2Q9BRP0 275 aa13.54□□□□□ -0.24
HDAC6-205ENST00000423941 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-205ENST00000423941 ZNF331Q9NQX6 463 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-205ENST00000423941 HMSDA8MTL9 139 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 SMLR1H3BR10 107 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 HLA-DRB4P13762 266 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 ACTL10Q5JWF8 245 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 GDF5OSQ5U4N7 250 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 SPATA31B1PQ5VZV4 182 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 LINC00052Q96N35 136 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
HDAC6-205ENST00000423941 HLA-DRB4X5D2U9 266 aa13.53□□□□□ -0.24
HDAC6-205ENST00000423941 ZNF253O75346 499 aa13.52□□□□□ -0.25
HDAC6-205ENST00000423941 DEFB1P60022 68 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms