RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 OR10P1Q8NGE3 313 aa12.76□□□□□ -0.37
HDLBP-208ENST00000422080 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
HDLBP-208ENST00000422080 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
HDLBP-208ENST00000422080 SLC25A39Q9BZJ4 359 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-208ENST00000422080 GSKIPQ9P0R6 139 aa12.76□□□□□ -0.37
HDLBP-208ENST00000422080 HIGD1AQ9Y241 93 aa12.76□□□□□ -0.37
HDLBP-208ENST00000422080 A8MTW9 85 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 H3BRN7 92 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 K7EPK0 472 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 SCGB1D2O95969 90 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 S100A7AQ86SG5 101 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 DNAH10Q8IVF4 4471 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 SCRT1Q9BWW7 348 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 SLC35B3Q9H1N7 401 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 C20orf85Q9H1P6 137 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 DOK5Q9P104 306 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 GOLT1BQ9Y3E0 138 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 RFNGQ9Y644 331 aa12.75□□□□□ -0.37
HDLBP-208ENST00000422080 IGHV4-4A0A075B6R2 117 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 DEFB131BA0A096LNP1 70 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 LYRM1O43325 122 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 CCNKO75909 580 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 LINC00869P0C866 280 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 RPL7P18124 248 aaKnown RBP12.74□□□□□ -0.37
HDLBP-208ENST00000422080 RRAS2P62070 204 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-208ENST00000422080 PRR20EP86478 221 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 PRR20CP86479 221 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 PRR20DP86480 221 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 PRR20BP86481 221 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 PRR20AP86496 221 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 GGACTQ9BVM4 153 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 MGAT4CQ9UBM8 478 aa12.74□□□□□ -0.37
HDLBP-208ENST00000422080 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
HDLBP-208ENST00000422080 IGHV3OR16-12A0A075B7B8 117 aa12.73□□□□□ -0.37
HDLBP-208ENST00000422080 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
HDLBP-208ENST00000422080 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
HDLBP-208ENST00000422080 MBPP02686 304 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-208ENST00000422080 TEPPQ6URK8 271 aa12.73□□□□□ -0.37
HDLBP-208ENST00000422080 ZNF767PQ75MW2 155 aa12.73□□□□□ -0.37
HDLBP-208ENST00000422080 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
HDLBP-208ENST00000422080 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 AMBPP02760 352 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 TCRBP04435 133 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 OR5G3P0C626 314 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 PXDC1Q5TGL8 231 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 C1orf158Q8N1D5 194 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
HDLBP-208ENST00000422080 TEX48A0A1B0GUV7 120 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 HBE1P02100 147 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 EMP1P54849 157 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 FGL1Q08830 312 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 ARL16Q0P5N6 197 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 IGF2BP2-AS1Q96M15 143 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 CCDC32Q9BV29 185 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 ARL6Q9H0F7 186 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 DKK2Q9UBU2 259 aa12.71□□□□□ -0.37
HDLBP-208ENST00000422080 FRAS1Q86XX4 4008 aa12.71□□□□□ -0.38
HDLBP-208ENST00000422080 A0A087X0K7 114 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
HDLBP-208ENST00000422080 SLC38A11Q08AI6 406 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 IGFL4Q6B9Z1 124 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 LINC00299Q6ZSB3 139 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 ZNF546Q86UE3 836 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 ZNF431Q8TF32 576 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-208ENST00000422080 UHRF2Q96PU4 802 aa12.7□□□□□ -0.38
HDLBP-208ENST00000422080 TRAV6A0A075B6T7 132 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 L7N2F9 121 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 GOSR2O14653 212 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 VAMP2P63027 116 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 RNF182Q8N6D2 247 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 NUDT15Q9NV35 164 aa12.69□□□□□ -0.38
HDLBP-208ENST00000422080 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 CCSO14618 274 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 AGPAT2O15120 278 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 OXA1LQ15070 435 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 FAM222AQ5U5X8 452 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 C12orf45Q8N5I9 185 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-208ENST00000422080 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 SEC22CQ9BRL7 303 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 NIPSNAP3BQ9BS92 247 aa12.68□□□□□ -0.38
HDLBP-208ENST00000422080 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 C5orf51A6NDU8 294 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 MRPS12O15235 138 aaKnown RBP12.67□□□□□ -0.38
HDLBP-208ENST00000422080 H2AFB2P0C5Z0 115 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 CXCL3P19876 107 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 B2MP61769 119 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 PSG3Q16557 428 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 C2orf50Q96LR7 162 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
HDLBP-208ENST00000422080 CRXO43186 299 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-208ENST00000422080 P0DMU3 169 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms