RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ELANEP08246 267 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 NMUP48645 174 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 ZNF524Q96C55 264 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 PYYP10082 97 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 ZNRD1Q9P1U0 126 aa8.67□□□□□ -1.02
PTCH1-206ENST00000421141 PHOX2AO14813 284 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 IGHV4-39P01824 125 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 ZNF138P52744 262 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 TMEM14BQ9NUH8 114 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 SELENOKQ9Y6D0 94 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 A0A1W2PPI3 338 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-206ENST00000421141 GNG5P63218 68 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 OR4C5Q8NGB2 326 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 CCL24O00175 119 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-206ENST00000421141 MGST2Q99735 147 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 ZNF98A6NK75 572 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 TCTEX1D4Q5JR98 221 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 CFAP161Q6P656 301 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 J3QR89 54 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 IGHV4-59P01825 116 aa8.66□□□□□ -1.02
PTCH1-206ENST00000421141 LHBP01229 141 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 NPIPB5A8MRT5 1133 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 FXYD7P58549 80 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 ORMDL3Q8N138 153 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 ST20Q9HBF5 79 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 TRAV12-3A0A0B4J271 114 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 C5orf52A6NGY3 159 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 H3BUA1 57 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 RNF138Q8WVD3 245 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 M0R143 59 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 FBLN7Q53RD9 439 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 DUX4L9Q6RFH8 374 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-206ENST00000421141 GGTLC1Q9BX51 225 aa8.65□□□□□ -1.02
PTCH1-206ENST00000421141 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.03
PTCH1-206ENST00000421141 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.03
PTCH1-206ENST00000421141 VAMP3Q15836 100 aa8.65□□□□□ -1.03
PTCH1-206ENST00000421141 CNTFRP26992 372 aa8.65□□□□□ -1.03
PTCH1-206ENST00000421141 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.03
PTCH1-206ENST00000421141 LYPD1Q8N2G4 141 aa8.65□□□□□ -1.03
PTCH1-206ENST00000421141 ZNF256Q9Y2P7 627 aaPredicted RBP8.65□□□□□ -1.03
PTCH1-206ENST00000421141 A0A087WX48 190 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 C9orf66Q5T8R8 295 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 GRIFINA4D1Z8 144 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 NMSQ5H8A3 153 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 SEM1Q6ZVN7 128 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 C8orf31Q8N9H6 132 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 IGKV1-5P01602 117 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 BIVMQ86UB2 503 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 CBLN2Q8IUK8 224 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 PRELID3AQ96N28 172 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 ABCA2Q9BZC7 2435 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 G3V318 75 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 RNF126Q9BV68 326 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 C22orf46C9J442 243 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 SRIP30626 198 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 ATP5G3P48201 142 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 EXOC3-AS1Q8N2X6 119 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-206ENST00000421141 NMBP08949 121 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 CCL20P78556 96 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 PDE6HQ13956 83 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 OR11H6Q8NGC7 330 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 RAB37Q96AX2 223 aa8.64□□□□□ -1.03
PTCH1-206ENST00000421141 NDUFA4O00483 81 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 CFPP27918 469 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 RNF144BQ7Z419 303 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 ZNF581Q9P0T4 197 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 PCNTO95613 3336 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 C1QL4Q86Z23 238 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 ATP5LO75964 103 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
PTCH1-206ENST00000421141 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-206ENST00000421141 TMEM136Q6ZRR5 245 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 MUC21A0A0G2JKD1 596 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 MUC21A0A140T8X8 626 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 LINC00205P59089 165 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 DEFB131AP59861 70 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 MST1LQ2TV78 715 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 LRRC75A-AS1Q8N1F1 130 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 NDUFA4L2Q9NRX3 87 aa8.63□□□□□ -1.03
PTCH1-206ENST00000421141 SCGB3A1Q96QR1 104 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 NRN1Q9NPD7 142 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 DIRC3C9JPN6 131 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 SNRPEP62304 92 aaKnown RBP8.62□□□□□ -1.03
PTCH1-206ENST00000421141 Q5BKY6 102 aa8.62□□□□□ -1.03
PTCH1-206ENST00000421141 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms