RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 TCEAL7Q9BRU2 100 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 PAXXQ9BUH6 204 aa10.9□□□□□ -0.66
SHMT1P1-201ENST00000419974 NBEAL1Q6ZS30 2694 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 A0A1W2PS18 150 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 HAX1O00165 279 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 ZNF253O75346 499 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 IGLC2P0DOY2 106 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 HIST1H1EP10412 219 aaKnown RBP10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 BCL2P10415 239 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 PDE6HQ13956 83 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 PEA15Q15121 130 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 NDUFA11Q86Y39 141 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 LYPD1Q8N2G4 141 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 VAX2Q9UIW0 290 aa10.89□□□□□ -0.67
SHMT1P1-201ENST00000419974 IGHV4OR15-8A0A075B7B6 117 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 A0A087WW49 117 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 A0A087X0K7 114 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 TRAV5A0A0B4J249 113 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 LOC102723971A0A1B0GUV8 181 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR7C2O60412 319 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 BMI1P35226 326 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 C16orf54Q6UWD8 224 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 ARL6IP6Q8N6S5 226 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR1N2Q8NGR9 330 aa10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 NARS2Q96I59 477 aaKnown RBP10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
SHMT1P1-201ENST00000419974 ADARB2-AS1A8MUL3 147 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR5B12Q96R08 314 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 TMEM231Q9H6L2 316 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 SMPXQ9UHP9 88 aa10.87□□□□□ -0.67
SHMT1P1-201ENST00000419974 IGHV3-35A0A0C4DH35 117 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 FAM74A7A6NL05 159 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 NBEAP1P0C6P0 100 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 MYCNOSP40205 109 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 CCDC28AQ8IWP9 274 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 SLC7A5P1Q8MH63 180 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 DPF1Q92782 380 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 CITED1Q99966 193 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 TMPRSS5Q9H3S3 457 aa10.86□□□□□ -0.67
SHMT1P1-201ENST00000419974 TRBV19A0A075B6N1 114 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 TMEM250H0YL14 139 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 CCL24O00175 119 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 PDE6DO43924 150 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 KRTAP10-3P60369 221 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 ICAM4Q14773 271 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 AWAT1Q58HT5 328 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR8I2Q8N0Y5 310 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 EIF5A2Q9GZV4 153 aaKnown RBP10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 CLEC5AQ9NY25 188 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
SHMT1P1-201ENST00000419974 ZNF320A2RRD8 509 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 CHEK1O14757 476 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 PYYP10082 97 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 GALR1P47211 349 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 CD81P60033 236 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 TOR2AQ5JU69 321 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 SAMD13Q5VXD3 122 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 C8orf86Q6ZUL3 223 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 RARRES2Q99969 163 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 C20orf24Q9BUV8 137 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 SLC35B3Q9H1N7 401 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 A0A1B0GV50 99 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 HELTA6NFD8 242 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 KRBOX1C9JBD0 128 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 H3BQ15 152 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 PAGE4O60829 102 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 EIF3GO75821 320 aaKnown RBP eCLIP10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 SYNJ2BPP57105 145 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 C10orf91Q5T1B1 145 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 OR9G4Q8NGQ1 327 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 C11orf52Q96A22 123 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 ZNF747Q9BV97 191 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 SMAD5-AS1Q9Y6J3 95 aa10.84□□□□□ -0.67
SHMT1P1-201ENST00000419974 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 C2orf70A6NJV1 201 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 F6UZH7 168 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms