RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SEC11CQ9BY50 192 aa4.62□□□□□ -1.67
HMGB3-202ENST00000419110 NKX6-2Q9C056 277 aaPredicted RBP4.62□□□□□ -1.67
HMGB3-202ENST00000419110 OR51M1Q9H341 326 aa4.62□□□□□ -1.67
HMGB3-202ENST00000419110 TMPRSS5Q9H3S3 457 aa4.62□□□□□ -1.67
HMGB3-202ENST00000419110 ESM1Q9NQ30 184 aa4.62□□□□□ -1.67
HMGB3-202ENST00000419110 TMEM14CQ9P0S9 112 aa4.62□□□□□ -1.67
HMGB3-202ENST00000419110 CARHSP1Q9Y2V2 147 aaKnown RBP4.62□□□□□ -1.67
HMGB3-202ENST00000419110 A0A1W2PRE2 83 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 NDUFA7O95182 113 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 SNAPINO95295 136 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 APOC3P02656 99 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 CLEC3BP05452 202 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 SRP19P09132 144 aaKnown RBP4.61□□□□□ -1.67
HMGB3-202ENST00000419110 OR10J4P0C629 311 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 PYYP10082 97 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 AKR1C3P42330 323 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 GALR1P47211 349 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 ATP5G3P48201 142 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 PDE6HQ13956 83 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 KIAA0141Q14154 515 aaPredicted RBP4.61□□□□□ -1.67
HMGB3-202ENST00000419110 RPEL1Q2QD12 228 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF343Q6P1L6 599 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 TOMM20LQ6UXN7 152 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 PATE2Q6UY27 113 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 LCNL1Q6ZST4 164 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 RNF152Q8N8N0 203 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 MYOZ3Q8TDC0 251 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 C11orf52Q96A22 123 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 FAM167A-AS1Q96KT0 104 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 RARRES2Q99969 163 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 SMIM7Q9BQ49 75 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 C20orf24Q9BUV8 137 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 ELOVL1Q9BW60 279 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 SERTAD4Q9NUC0 356 aa4.61□□□□□ -1.67
HMGB3-202ENST00000419110 PEF1Q9UBV8 284 aaKnown RBP4.61□□□□□ -1.67
HMGB3-202ENST00000419110 TRAV5A0A0B4J249 113 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 IGHV3-35A0A0C4DH35 117 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 A0A1W2PS18 150 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF98A6NK75 572 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 GGTLC3B5MD39 225 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 M0R036 132 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 RPLP1P05386 114 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 HIST1H1EP10412 219 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 ADCYAP1P18509 176 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 MEOX2P50222 304 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 CD81P60033 236 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 SRSF3P84103 164 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 PNRC1Q12796 327 aaPredicted RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF674Q2M3X9 581 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 FAM106AQ4KMX7 169 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 FAM74A3Q4VXF1 159 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 MORN5Q5VZ52 161 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 LEMD1Q68G75 181 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 Q71RC1 249 aaPredicted RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 OR8I2Q8N0Y5 310 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 C5orf17Q8NAS9 161 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 KLHL30-AS1Q8NEE0 82 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 BLNKQ8WV28 456 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 C4orf3Q8WVX3 66 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 RPUSD4Q96CM3 377 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 FXYD5Q96DB9 178 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 UBE2E2Q96LR5 201 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 OR5B12Q96R08 314 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 KLK15Q9H2R5 256 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 C16orf95Q9H693 158 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 AAMDCQ9H7C9 122 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 DAZ1Q9NQZ3 744 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 MRPL27Q9P0M9 148 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 UFC1Q9Y3C8 167 aa4.6□□□□□ -1.67
HMGB3-202ENST00000419110 YTHDF2Q9Y5A9 579 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 FN1P02751 2386 aaKnown RBP4.6□□□□□ -1.67
HMGB3-202ENST00000419110 IGHV3OR16-8A0A075B7F1 116 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 A0A087X0K7 114 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 HELTA6NFD8 242 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF727A8MUV8 499 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 A8MWP6 167 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 M0QZ24 198 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 PEX7O00628 323 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF253O75346 499 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 CRLF1O75462 422 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 TRBV12-3P01733 135 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 SLC25A5P05141 298 aaKnown RBP4.59□□□□□ -1.67
HMGB3-202ENST00000419110 IGLC2P0DOY2 106 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 HIVEP1P15822 2718 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 NPPCP23582 126 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 CNN1P51911 297 aaKnown RBP4.59□□□□□ -1.67
HMGB3-202ENST00000419110 PSG9Q00887 426 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 RHEBQ15382 184 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 AWAT1Q58HT5 328 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 C1orf194Q5T5A4 169 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 SAMD13Q5VXD3 122 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 FAM90A2PQ658T7 463 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 C10orf99Q6UWK7 81 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 REC114Q7Z4M0 266 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 C1QL4Q86Z23 238 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 CMTM2Q8TAZ6 248 aa4.59□□□□□ -1.67
HMGB3-202ENST00000419110 ZNF503Q96F45 646 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms