RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 EDN2P20800 178 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 TFPI2P48307 235 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 RAB2AP61019 212 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 KHDC3LQ587J8 217 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 C1orf194Q5T5A4 169 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 C16orf54Q6UWD8 224 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 BPIFA4PQ86YQ2 179 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 STOML3Q8TAV4 291 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 SHANK2-AS3Q9BTD1 123 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
TRIM48-201ENST00000417545 CYTL1Q9NRR1 136 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 SIGLEC8Q9NYZ4 499 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 MLXQ9UH92 298 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 FUT9Q9Y231 359 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 COL6A5A8TX70 2615 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 OR4C46A6NHA9 309 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 UMAD1C9J7I0 102 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 BUB3O43684 328 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 SEC11BP0C7V7 166 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 C8orf88P0DMB2 117 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 SPP1P10451 314 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 DEFB114Q30KQ6 69 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 CD300EQ496F6 205 aaPredicted RBP6.42□□□□□ -1.38
TRIM48-201ENST00000417545 GCSAMLQ5JQS6 135 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 LEMD1Q68G75 181 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 WFDC3Q8IUB2 231 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 GBGT1Q8N5D6 347 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 FAM213BQ8TBF2 198 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 TMED6Q8WW62 240 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 VSIRQ9H7M9 311 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 RFNGQ9Y644 331 aa6.42□□□□□ -1.38
TRIM48-201ENST00000417545 TENM1Q9UKZ4 2725 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 TRAV25A0A0B4J276 109 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 TEX46H3BTG2 121 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 IGLV1-51P01701 117 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 ID1P41134 155 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 MEOX2P50222 304 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 PATE2Q6UY27 113 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 IL34Q6ZMJ4 242 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 MIR17HGQ75NE6 70 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 TMEM61Q8N0U2 210 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 TMEM37Q8WXS4 190 aa6.41□□□□□ -1.38
TRIM48-201ENST00000417545 TRAV5A0A0B4J249 113 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 CTXND1A0A1B0GTU2 59 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 HMGB3O15347 200 aaKnown RBP6.4□□□□□ -1.39
TRIM48-201ENST00000417545 GP9P14770 177 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.39
TRIM48-201ENST00000417545 SAMD13Q5VXD3 122 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 SPATA31B1PQ5VZV4 182 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 GLMPQ8WWB7 406 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 PHYHIPLQ96FC7 376 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF414Q96IQ9 312 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 C16orf92Q96LL3 132 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 SPAG8Q99932 426 aaPredicted RBP6.4□□□□□ -1.39
TRIM48-201ENST00000417545 PAXXQ9BUH6 204 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 OR51M1Q9H341 326 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 SEPSECSQ9HD40 501 aaKnown RBP6.4□□□□□ -1.39
TRIM48-201ENST00000417545 NRN1Q9NPD7 142 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF256Q9Y2P7 627 aaPredicted RBP6.4□□□□□ -1.39
TRIM48-201ENST00000417545 U3KQE9 123 aa6.4□□□□□ -1.39
TRIM48-201ENST00000417545 STAB1Q9NY15 2570 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 ANK2Q01484 3957 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 MAP1LC3B2A6NCE7 125 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 G3V4G9 280 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 TSPAN4O14817 238 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 CXorf1O96002 111 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 OR10J4P0C629 311 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 RAB5CP51148 216 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 CD81P60033 236 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 SNRPD3P62318 126 aaKnown RBP6.39□□□□□ -1.39
TRIM48-201ENST00000417545 LCN15Q6UWW0 184 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 ALKAL2Q6UX46 152 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 DPPA3Q6W0C5 159 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 ADAMTSL5Q6ZMM2 481 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 PQLC2Q6ZP29 291 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 BLNKQ8WV28 456 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 MAP1LC3BQ9GZQ8 125 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 MS4A6AQ9H2W1 248 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 RPRMQ9NS64 109 aa6.39□□□□□ -1.39
TRIM48-201ENST00000417545 A0A1B0GV50 99 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 IZUMO1RA6ND01 250 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF705EA8MWA4 302 aaPredicted RBP6.38□□□□□ -1.39
TRIM48-201ENST00000417545 IFNA7P01567 189 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 SNRPCP09234 159 aaKnown RBP6.38□□□□□ -1.39
TRIM48-201ENST00000417545 H2AFB1P0C5Y9 115 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 PYYP10082 97 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 CMC4P56277 68 aaPredicted RBP6.38□□□□□ -1.39
TRIM48-201ENST00000417545 GUK1Q16774 197 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 MORN5Q5VZ52 161 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 RNF141Q8WVD5 230 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 LINC00052Q96N35 136 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 SLC50A1Q9BRV3 221 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 SLC25A2Q9BXI2 301 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 AAMDCQ9H7C9 122 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 TMEM14CQ9P0S9 112 aa6.38□□□□□ -1.39
TRIM48-201ENST00000417545 OR11H12B2RN74 326 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 H3BTX0 84 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms