RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
VPS16-204ENST00000417508 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 F6UB75 175 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 DUSP14O95147 198 aaKnown RBP13.19□□□□□ -0.3
VPS16-204ENST00000417508 P0DMU3 169 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
VPS16-204ENST00000417508 OXA1LQ15070 435 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 TMEM14EPQ6UXP3 125 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 ZNF767PQ75MW2 155 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 C20orf173Q96LM9 149 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 C17orf77Q96MU5 243 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 SHANK2-AS3Q9BTD1 123 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
VPS16-204ENST00000417508 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
VPS16-204ENST00000417508 H3BRN7 92 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 SSSCA1O60232 199 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 TSC22D2O75157 780 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 HBE1P02100 147 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 EMP1P54849 157 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 IAH1Q2TAA2 248 aaPredicted RBP13.18□□□□□ -0.3
VPS16-204ENST00000417508 C1orf158Q8N1D5 194 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 DKK2Q9UBU2 259 aa13.18□□□□□ -0.3
VPS16-204ENST00000417508 LINC00854A0A1B0GVQ3 168 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 K7EPK0 472 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
VPS16-204ENST00000417508 BTCP35070 178 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 B2MP61769 119 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 RRN3P1Q2M238 152 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 AMTNQ6UX39 209 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 NIPSNAP3BQ9BS92 247 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 GGACTQ9BVM4 153 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 MGAT4CQ9UBM8 478 aa13.17□□□□□ -0.3
VPS16-204ENST00000417508 LINC00869P0C866 280 aa13.16□□□□□ -0.3
VPS16-204ENST00000417508 IL7P13232 177 aa13.16□□□□□ -0.3
VPS16-204ENST00000417508 TEPPQ6URK8 271 aa13.16□□□□□ -0.3
VPS16-204ENST00000417508 POM121L12Q8N7R1 296 aa13.16□□□□□ -0.3
VPS16-204ENST00000417508 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
VPS16-204ENST00000417508 SCRT1Q9BWW7 348 aa13.16□□□□□ -0.3
VPS16-204ENST00000417508 NDUFA13Q9P0J0 144 aa13.16□□□□□ -0.3
VPS16-204ENST00000417508 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
VPS16-204ENST00000417508 OR5G3P0C626 314 aa13.15□□□□□ -0.3
VPS16-204ENST00000417508 METTL15P1P0C7V9 234 aa13.15□□□□□ -0.3
VPS16-204ENST00000417508 FAM222AQ5U5X8 452 aa13.15□□□□□ -0.3
VPS16-204ENST00000417508 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
VPS16-204ENST00000417508 GSKIPQ9P0R6 139 aa13.15□□□□□ -0.3
VPS16-204ENST00000417508 A0A087X0K7 114 aa13.14□□□□□ -0.31
VPS16-204ENST00000417508 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
VPS16-204ENST00000417508 SCGB1D2O95969 90 aa13.14□□□□□ -0.31
VPS16-204ENST00000417508 CNN1P51911 297 aaKnown RBP13.14□□□□□ -0.31
VPS16-204ENST00000417508 RRAS2P62070 204 aaPredicted RBP13.14□□□□□ -0.31
VPS16-204ENST00000417508 FGL1Q08830 312 aa13.14□□□□□ -0.31
VPS16-204ENST00000417508 GSG1LQ6UXU4 331 aa13.14□□□□□ -0.31
VPS16-204ENST00000417508 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
VPS16-204ENST00000417508 FRAS1Q86XX4 4008 aa13.13□□□□□ -0.31
VPS16-204ENST00000417508 GOSR2O14653 212 aa13.13□□□□□ -0.31
VPS16-204ENST00000417508 CCNKO75909 580 aa13.13□□□□□ -0.31
VPS16-204ENST00000417508 LINC00336Q6ZUF6 198 aa13.13□□□□□ -0.31
VPS16-204ENST00000417508 LRRC20Q8TCA0 184 aa13.13□□□□□ -0.31
VPS16-204ENST00000417508 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
VPS16-204ENST00000417508 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
VPS16-204ENST00000417508 YTHDF2Q9Y5A9 579 aaKnown RBP13.13□□□□□ -0.31
VPS16-204ENST00000417508 C7orf66A4D0T2 115 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 PLA2G10O15496 165 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 LYRM1O43325 122 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 INSP01308 110 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 MBPP02686 304 aaPredicted RBP13.12□□□□□ -0.31
VPS16-204ENST00000417508 ZNF846Q147U1 533 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 ZNF738Q8NE65 137 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 ARV1Q9H2C2 271 aa13.12□□□□□ -0.31
VPS16-204ENST00000417508 VPS13DQ5THJ4 4388 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 TCRBP04435 133 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 CXCL2P19875 107 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 CXCL3P19876 107 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 PSG3Q16557 428 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 PATE2Q6UY27 113 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 UHRF2Q96PU4 802 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
VPS16-204ENST00000417508 L7N2F9 121 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 AGPAT2O15120 278 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 CRXO43186 299 aaPredicted RBP13.1□□□□□ -0.31
VPS16-204ENST00000417508 TSPOP30536 169 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 DAD1P61803 113 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 VAMP2P63027 116 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 OR8A1Q8NGG7 326 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 PPP1R14DQ9NXH3 145 aa13.1□□□□□ -0.31
VPS16-204ENST00000417508 LYRM9A8MSI8 78 aa13.09□□□□□ -0.31
VPS16-204ENST00000417508 M0R2Z0 102 aa13.09□□□□□ -0.31
VPS16-204ENST00000417508 SLC38A11Q08AI6 406 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms