RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SCRT1Q9BWW7 348 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 WDR61Q9GZS3 305 aaKnown RBP17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 SLC25A32Q9H2D1 315 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 ZMAT4Q9H898 229 aa17.15■□□□□ 0.34
SMARCB1-205ENST00000417137 C17orf112F2Z3M2 114 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 ID1P41134 155 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 MEOX2P50222 304 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 LINC00305Q7Z4B0 112 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 INO80EQ8NBZ0 244 aaPredicted RBP17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 UHRF2Q96PU4 802 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 CITED4Q96RK1 184 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 PXMP4Q9Y6I8 212 aa17.14■□□□□ 0.33
SMARCB1-205ENST00000417137 ZNF688P0C7X2 276 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 Q5BKY6 102 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 LEMD1Q68G75 181 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 FAM24BQ8N5W8 94 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 AQP10Q96PS8 301 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 RSG1Q9BU20 258 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 SMIM3Q9BZL3 60 aa17.13■□□□□ 0.33
SMARCB1-205ENST00000417137 TMEM37Q8WXS4 190 aa17.12■□□□□ 0.33
SMARCB1-205ENST00000417137 ATF4P18848 351 aaPredicted RBP17.11■□□□□ 0.33
SMARCB1-205ENST00000417137 APOC4P55056 127 aa17.11■□□□□ 0.33
SMARCB1-205ENST00000417137 PSMG4Q5JS54 123 aa17.11■□□□□ 0.33
SMARCB1-205ENST00000417137 GATAD1Q8WUU5 269 aa17.11■□□□□ 0.33
SMARCB1-205ENST00000417137 PARD6GQ9BYG4 376 aaPredicted RBP17.11■□□□□ 0.33
SMARCB1-205ENST00000417137 FXYD6-FXYD2A0A087WZ82 144 aa17.1■□□□□ 0.33
SMARCB1-205ENST00000417137 SPATA25Q9BR10 227 aa17.1■□□□□ 0.33
SMARCB1-205ENST00000417137 TM2D3Q9BRN9 247 aa17.1■□□□□ 0.33
SMARCB1-205ENST00000417137 KIR2DL5BA0A0G2JN68 375 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 KIR2DL5BA0A0G2JPC4 375 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 ISLRO14498 428 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 PSMB3P49720 205 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 BPIFA4PQ86YQ2 179 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 KIR2DL5AQ8N109 375 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 KIR2DL5BQ8NHK3 375 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 C16orf92Q96LL3 132 aa17.09■□□□□ 0.33
SMARCB1-205ENST00000417137 ZNF266Q14584 549 aa17.08■□□□□ 0.32
SMARCB1-205ENST00000417137 ZNF124Q15973 351 aa17.08■□□□□ 0.32
SMARCB1-205ENST00000417137 STHQ8IWL8 128 aa17.08■□□□□ 0.32
SMARCB1-205ENST00000417137 LINC00052Q96N35 136 aa17.08■□□□□ 0.32
SMARCB1-205ENST00000417137 WFDC1Q9HC57 220 aa17.08■□□□□ 0.32
SMARCB1-205ENST00000417137 U3KQK5 164 aa17.08■□□□□ 0.32
SMARCB1-205ENST00000417137 UBE2CO00762 179 aa17.07■□□□□ 0.32
SMARCB1-205ENST00000417137 RPL35AP18077 110 aaKnown RBP17.07■□□□□ 0.32
SMARCB1-205ENST00000417137 TNFSF18Q9UNG2 199 aa17.07■□□□□ 0.32
SMARCB1-205ENST00000417137 SOCS3O14543 225 aa17.06■□□□□ 0.32
SMARCB1-205ENST00000417137 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.06■□□□□ 0.32
SMARCB1-205ENST00000417137 LRRC20Q8TCA0 184 aa17.06■□□□□ 0.32
SMARCB1-205ENST00000417137 A0A087X0K7 114 aa17.05■□□□□ 0.32
SMARCB1-205ENST00000417137 Q6ZNX1 250 aa17.05■□□□□ 0.32
SMARCB1-205ENST00000417137 CSTL1Q9H114 145 aa17.05■□□□□ 0.32
SMARCB1-205ENST00000417137 ACTL10Q5JWF8 245 aa17.04■□□□□ 0.32
SMARCB1-205ENST00000417137 RCHY1Q96PM5 261 aa17.04■□□□□ 0.32
SMARCB1-205ENST00000417137 KNCNA6PVL3 124 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 FFAR4Q5NUL3 377 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 FAM78BQ5VT40 261 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 MORN5Q5VZ52 161 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 C17orf77Q96MU5 243 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 RPRMQ9NS64 109 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 TIMM9Q9Y5J7 89 aa17.03■□□□□ 0.32
SMARCB1-205ENST00000417137 BORCS7-ASMTA0A0B4J1R7 106 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 TRAV5A0A0B4J249 113 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 RNF222A6NCQ9 220 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 G3V3Q6 166 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 MRPS12O15235 138 aaKnown RBP17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 CXCL2P19875 107 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 GCSAMLQ5JQS6 135 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 SPATA31B1PQ5VZV4 182 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 Q6ZWC4 215 aa17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 MRPL32Q9BYC8 188 aaKnown RBP17.02■□□□□ 0.32
SMARCB1-205ENST00000417137 ARPC5O15511 151 aa17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 GUK1Q16774 197 aa17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 EBLN2Q6P2I7 272 aa17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 LCN15Q6UWW0 184 aa17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 TRPT1Q86TN4 253 aaKnown RBP17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 MFFQ9GZY8 342 aa17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 HRH4Q9H3N8 390 aa17.01■□□□□ 0.31
SMARCB1-205ENST00000417137 SMLR1H3BR10 107 aa17■□□□□ 0.31
SMARCB1-205ENST00000417137 TAAR5O14804 337 aa17■□□□□ 0.31
SMARCB1-205ENST00000417137 MORN3Q6PF18 240 aaPredicted RBP17■□□□□ 0.31
SMARCB1-205ENST00000417137 FOXI2Q6ZQN5 318 aa17■□□□□ 0.31
SMARCB1-205ENST00000417137 SLC50A1Q9BRV3 221 aa17■□□□□ 0.31
SMARCB1-205ENST00000417137 TMEM14CQ9P0S9 112 aa17■□□□□ 0.31
SMARCB1-205ENST00000417137 SPP1P10451 314 aa16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 NUTF2P61970 127 aaKnown RBP16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 ACOT6Q3I5F7 207 aaPredicted RBP16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 HSD17B11Q8NBQ5 300 aa16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 SAV1Q9H4B6 383 aaPredicted RBP16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 FUT9Q9Y231 359 aa16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 TP53TG1Q9Y2A0 90 aa16.99■□□□□ 0.31
SMARCB1-205ENST00000417137 H3BMM0 161 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 IGLC2P0DOY2 106 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 HLA-DRB4P13762 266 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 RHOBP62745 196 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 TMEM41BQ5BJD5 291 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 CLEC5AQ9NY25 188 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 HLA-DRB4X5D2U9 266 aa16.98■□□□□ 0.31
SMARCB1-205ENST00000417137 TRAV8-2A0A0B4J237 113 aa16.97■□□□□ 0.31
SMARCB1-205ENST00000417137 HMSDA8MTL9 139 aa16.97■□□□□ 0.31
SMARCB1-205ENST00000417137 HIST1H1EP10412 219 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms