RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 FXYD5Q96DB9 178 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 TTTY13Q9BZ97 58 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 TRGV5A0A0B4J1U4 118 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 SERTM2A0A1B0GWG4 89 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 KIR2DS2P43631 304 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 PRCDQ00LT1 54 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 Q71RC1 249 aaPredicted RBP11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 ITLN1Q8WWA0 313 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 COL6A6A6NMZ7 2263 aa11.84□□□□□ -0.51
NCKIPSD-204ENST00000416649 ARMS2P0C7Q2 107 aa11.83□□□□□ -0.51
NCKIPSD-204ENST00000416649 FAM201AQ5SY85 155 aa11.83□□□□□ -0.51
NCKIPSD-204ENST00000416649 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.51
NCKIPSD-204ENST00000416649 OR2Z1Q8NG97 314 aa11.83□□□□□ -0.51
NCKIPSD-204ENST00000416649 ZNRD1Q9P1U0 126 aa11.83□□□□□ -0.51
NCKIPSD-204ENST00000416649 PRR33A8MZF0 331 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 K7EQM0 130 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 RNASE2P10153 161 aaKnown RBP11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 CRYBA4P53673 196 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 ETDBQ3ZM63 59 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 CT45A1Q5HYN5 189 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 CNEP1R1Q8N9A8 125 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 CT45A3Q8NHU0 189 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 DDB2Q92466 427 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 PTPRQQ9UMZ3 2332 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 FXYD2P54710 66 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 SMPXQ9UHP9 88 aa11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 SOX21Q9Y651 276 aaPredicted RBP11.83□□□□□ -0.52
NCKIPSD-204ENST00000416649 hADV38S2A0JD32 116 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 SRRM4A7MD48 611 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 LOXL3P58215 753 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 OR4X2Q8NGF9 303 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 OR9G4Q8NGQ1 327 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 CXXC4Q9H2H0 198 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 J3QR89 54 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 CFHR2P36980 270 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 OR1L4Q8NGR5 311 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 SRSF12Q8WXF0 261 aaKnown RBP11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 ARPC1AQ92747 370 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 ABHD17AQ96GS6 310 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 PRSS22Q9GZN4 317 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 CALYQ9NYX4 217 aa11.82□□□□□ -0.52
NCKIPSD-204ENST00000416649 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
NCKIPSD-204ENST00000416649 LRBAP50851 2863 aa11.81□□□□□ -0.52
NCKIPSD-204ENST00000416649 ASCL5Q7RTU5 278 aa11.81□□□□□ -0.52
NCKIPSD-204ENST00000416649 PRR7Q8TB68 274 aa11.81□□□□□ -0.52
NCKIPSD-204ENST00000416649 VGLL1Q99990 258 aa11.81□□□□□ -0.52
NCKIPSD-204ENST00000416649 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 UPK2O00526 184 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 C2orf83Q53S99 150 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 TMEM178AQ8NBL3 297 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 ZNF414Q96IQ9 312 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 MLST8Q9BVC4 326 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 COL12A1Q99715 3063 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 K7EM74 188 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 STXBP6Q8NFX7 210 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 C19orf71A6NCJ1 209 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 DLL1O00548 723 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 INO80CQ6PI98 192 aaPredicted RBP11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 AMTNQ6UX39 209 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 BSNQ9UPA5 3926 aa11.8□□□□□ -0.52
NCKIPSD-204ENST00000416649 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 AKAP6Q13023 2319 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 H3BMG7 143 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 LTAP01374 205 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 ERHP84090 104 aaKnown RBP11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 ZNF714Q96N38 554 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 MAP1AP78559 2803 aaPredicted RBP11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 DKK2Q9UBU2 259 aa11.79□□□□□ -0.52
NCKIPSD-204ENST00000416649 APELAP0DMC3 54 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 OR5AN1Q8NGI8 311 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 Q9H3A6 140 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 TMSB15BA0A087X1C1 80 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 A0A096LNJ9 63 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 KBTBD11-OT1A0A1B0GTJ5 212 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 D6R8Y8 96 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 E7EUB6 86 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 HAX1O00165 279 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 TCRAP04437 139 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 INSL3P51460 131 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 CT83Q5H943 113 aa11.78□□□□□ -0.52
NCKIPSD-204ENST00000416649 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms