RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SLC45A2Q9UMX9 530 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 NACAE9PAV3 2078 aa10.81□□□□□ -0.68
UBXN4-203ENST00000416538 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 SMCO3A2RU48 225 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 CENPXA8MT69 81 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 CCSO14618 274 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 SCGB1D2O95969 90 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 METTL15P1P0C7V9 234 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 PRB4P10163 310 aaPredicted RBP10.8□□□□□ -0.68
UBXN4-203ENST00000416538 RPP30P78346 268 aaKnown RBP10.8□□□□□ -0.68
UBXN4-203ENST00000416538 IAH1Q2TAA2 248 aaPredicted RBP10.8□□□□□ -0.68
UBXN4-203ENST00000416538 C4orf46Q504U0 113 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 RNF182Q8N6D2 247 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 ZBTB8BQ8NAP8 495 aaPredicted RBP10.8□□□□□ -0.68
UBXN4-203ENST00000416538 MITD1Q8WV92 249 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 SMIM8Q96KF7 97 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 UHRF2Q96PU4 802 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 NEU1Q99519 415 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 C20orf85Q9H1P6 137 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
UBXN4-203ENST00000416538 CFDP00746 253 aaPredicted RBP10.79□□□□□ -0.68
UBXN4-203ENST00000416538 AMBPP02760 352 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 GALR1P47211 349 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 TCTAP57738 103 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 DLK1P80370 383 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 C7orf50Q9BRJ6 194 aaKnown RBP10.79□□□□□ -0.68
UBXN4-203ENST00000416538 SHANK2-AS3Q9BTD1 123 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 TMEM147Q9BVK8 224 aa10.79□□□□□ -0.68
UBXN4-203ENST00000416538 SLC25A39Q9BZJ4 359 aaPredicted RBP10.79□□□□□ -0.68
UBXN4-203ENST00000416538 DEFB131BA0A096LNP1 70 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 IFNA21P01568 189 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 MBPP02686 304 aaPredicted RBP10.78□□□□□ -0.68
UBXN4-203ENST00000416538 LINC00869P0C866 280 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 MEOX2P50222 304 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 EMP1P54849 157 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 PLP1P60201 277 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 PSG9Q00887 426 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 SLC38A11Q08AI6 406 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 PATE2Q6UY27 113 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 RNF126Q9BV68 326 aa10.78□□□□□ -0.68
UBXN4-203ENST00000416538 MRPS12O15235 138 aaKnown RBP10.77□□□□□ -0.69
UBXN4-203ENST00000416538 LYRM1O43325 122 aa10.77□□□□□ -0.69
UBXN4-203ENST00000416538 IL5P05113 134 aa10.77□□□□□ -0.69
UBXN4-203ENST00000416538 SEC22CQ9BRL7 303 aa10.77□□□□□ -0.69
UBXN4-203ENST00000416538 C11orf1Q9H5F2 150 aa10.77□□□□□ -0.69
UBXN4-203ENST00000416538 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
UBXN4-203ENST00000416538 HIGD1AQ9Y241 93 aa10.77□□□□□ -0.69
UBXN4-203ENST00000416538 TRAV6A0A075B6T7 132 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 C7orf66A4D0T2 115 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 K7EPK0 472 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
UBXN4-203ENST00000416538 TSC22D2O75157 780 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 PRM2P04554 102 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 CNN1P51911 297 aaKnown RBP10.76□□□□□ -0.69
UBXN4-203ENST00000416538 FAM222AQ5U5X8 452 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 EBLN2Q6P2I7 272 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 OR11H7Q8NGC8 314 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 GSKIPQ9P0R6 139 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 DKK2Q9UBU2 259 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 RFNGQ9Y644 331 aa10.76□□□□□ -0.69
UBXN4-203ENST00000416538 SMIM9A6NGZ8 99 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 M0R2Z0 102 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 SPINK13Q1W4C9 94 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 SAMD13Q5VXD3 122 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 MORN5Q5VZ52 161 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 GPR82Q96P67 336 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 NUDT15Q9NV35 164 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 FAT2Q9NYQ8 4349 aa10.75□□□□□ -0.69
UBXN4-203ENST00000416538 A0A087X0K7 114 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 FNDC10F2Z333 226 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 HYPMO75409 117 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 TCRBP04435 133 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 OR5G3P0C626 314 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 TAS2R30P59541 319 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 RAP2BP61225 183 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 FGL1Q08830 312 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 CNPY1Q3B7I2 92 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 BAP18Q8IXM2 172 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 IGF2BP2-AS1Q96M15 143 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 MGST2Q99735 147 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 ARL6Q9H0F7 186 aa10.74□□□□□ -0.69
UBXN4-203ENST00000416538 YTHDF2Q9Y5A9 579 aaKnown RBP10.74□□□□□ -0.69
UBXN4-203ENST00000416538 LOC102723971A0A1B0GUV8 181 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 SNRPCP09234 159 aaKnown RBP10.73□□□□□ -0.69
UBXN4-203ENST00000416538 SPART-AS1P0CW21 52 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
UBXN4-203ENST00000416538 CXCL3P19876 107 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 SELENOTP62341 195 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 TEPPQ6URK8 271 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 OR10P1Q8NGE3 313 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 ARV1Q9H2C2 271 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 NPVFQ9HCQ7 196 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 MGAT4CQ9UBM8 478 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 GOLT1BQ9Y3E0 138 aa10.73□□□□□ -0.69
UBXN4-203ENST00000416538 DNAH2Q9P225 4427 aa10.72□□□□□ -0.69
UBXN4-203ENST00000416538 TMEM189A5PLL7 270 aa10.72□□□□□ -0.69
UBXN4-203ENST00000416538 AGPAT2O15120 278 aa10.72□□□□□ -0.69
UBXN4-203ENST00000416538 HBE1P02100 147 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms