RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 IGHV1-69P01742 117 aa12.71□□□□□ -0.38
PHRF1-203ENST00000416188 EVI2AP22794 236 aa12.71□□□□□ -0.38
PHRF1-203ENST00000416188 COQ2Q96H96 371 aa12.71□□□□□ -0.38
PHRF1-203ENST00000416188 SCRT1Q9BWW7 348 aa12.71□□□□□ -0.38
PHRF1-203ENST00000416188 VCX2Q9H322 139 aa12.71□□□□□ -0.38
PHRF1-203ENST00000416188 DUSP14O95147 198 aaKnown RBP12.7□□□□□ -0.38
PHRF1-203ENST00000416188 GZMBP10144 247 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 TSKUQ8WUA8 353 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 UBE2E1P51965 193 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 QRFPP83859 136 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 HBDP02042 147 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 Q6P435 159 aa12.7□□□□□ -0.38
PHRF1-203ENST00000416188 IGHV2-70DA0A0C4DH43 119 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 NDUFS7O75251 213 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 PSMG4Q5JS54 123 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 TMEM14EPQ6UXP3 125 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 AGMATQ9BSE5 352 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 IGKV2-40A0A087WW87 121 aaPredicted RBP12.69□□□□□ -0.38
PHRF1-203ENST00000416188 A0A1B0GWB2 263 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 IGKV2D-40P01614 121 aaPredicted RBP12.69□□□□□ -0.38
PHRF1-203ENST00000416188 TYMSP04818 313 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 CXCL1P09341 107 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 MGST2Q99735 147 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
PHRF1-203ENST00000416188 C5orf64Q2M2E5 130 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 DERL1Q9BUN8 251 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 SIGLEC15Q6ZMC9 328 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 SLC25A48Q6ZT89 311 aaKnown RBP12.69□□□□□ -0.38
PHRF1-203ENST00000416188 SPRY4Q9C004 299 aa12.69□□□□□ -0.38
PHRF1-203ENST00000416188 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 HIST1H2BLQ99880 126 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 SFTA2Q6UW10 78 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 RNF5Q99942 180 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 GNB1LQ9BYB4 327 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 SLC25A39Q9BZJ4 359 aaPredicted RBP12.68□□□□□ -0.38
PHRF1-203ENST00000416188 LAMTOR2Q9Y2Q5 125 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 CNTFRP26992 372 aa12.68□□□□□ -0.38
PHRF1-203ENST00000416188 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.387e-7■■■□□ 15
PHRF1-203ENST00000416188 PPBPP02775 128 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 CACNG7P62955 275 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
PHRF1-203ENST00000416188 H0YJW9 148 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 NRGNQ92686 78 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 CYSLTR1Q9Y271 337 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 SPCS1Q9Y6A9 102 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 IGLV1-44P01699 117 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 NIT1Q86X76 327 aa12.67□□□□□ -0.38
PHRF1-203ENST00000416188 KIF26AQ9ULI4 1882 aaPredicted RBP12.67□□□□□ -0.38
PHRF1-203ENST00000416188 TRAV1-1A0A0B4J248 108 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 NTF4P34130 210 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 FAM110DQ8TAY7 271 aaPredicted RBP12.66□□□□□ -0.38
PHRF1-203ENST00000416188 TRBV24-1A0A075B6N3 115 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 TRBV6-6A0A0A6YYG2 114 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 TRBV7-9A0A0J9YWB2 115 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 OVOL1O14753 267 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 CFHR2P36980 270 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 FHL1Q13642 323 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 LINC01551Q86U37 167 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 SPOCK3Q9BQ16 436 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
PHRF1-203ENST00000416188 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
PHRF1-203ENST00000416188 HIST3H2BBQ8N257 126 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 Q8TCH9 128 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 GATA4P43694 442 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 RNF166Q96A37 237 aaPredicted RBP12.65□□□□□ -0.38
PHRF1-203ENST00000416188 TRGV4A0A0C4DH28 118 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 Q6ZR03 302 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 NHP2Q9NX24 153 aaKnown RBP12.65□□□□□ -0.38
PHRF1-203ENST00000416188 TRAV9-2A0A087WT02 112 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 H3BUT2 72 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 Q6ZRM9 215 aa12.65□□□□□ -0.38
PHRF1-203ENST00000416188 SHISA9B4DS77 424 aa12.65□□□□□ -0.39
PHRF1-203ENST00000416188 F2Z2F3 143 aa12.65□□□□□ -0.39
PHRF1-203ENST00000416188 NDPQ00604 133 aa12.65□□□□□ -0.39
PHRF1-203ENST00000416188 FOXL1Q12952 345 aa12.65□□□□□ -0.39
PHRF1-203ENST00000416188 DPM2O94777 84 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 NCR2O95944 276 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 TCRAP04437 139 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 MLANAQ16655 118 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 TRGV9Q99603 122 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 TMEM242Q9NWH2 141 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 SIGLEC9Q9Y336 463 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 PLXNA2O75051 1894 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 IGKV1-16P04430 117 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 TRGV11A0A075B6L2 103 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms