RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SCNM1Q9BWG6 230 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 TMEM133Q9H2Q1 129 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 A0A087X0K7 114 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 IGHV3-21A0A0B4J1V1 117 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 TEX22C9J3V5 150 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 K7EQM0 130 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 C2orf91Q6ZV80 131 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 CTSZQ9UBR2 303 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 IGHV3-72A0A0B4J1Y9 119 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 PSG9Q00887 426 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 ERASQ7Z444 233 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 NGBQ9NPG2 151 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 RNF151Q2KHN1 245 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 LDLRAD2Q5SZI1 272 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 ZNF493Q6ZR52 646 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 PRSS3P2Q8NHM4 247 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 RASL11BQ9BPW5 248 aa13.99□□□□□ -0.17
SDCBP-202ENST00000413219 MCRIP2Q9BUT9 160 aaKnown RBP13.99□□□□□ -0.17
SDCBP-202ENST00000413219 H0Y8G0 127 aa13.98□□□□□ -0.17
SDCBP-202ENST00000413219 I3L2K1 104 aa13.98□□□□□ -0.17
SDCBP-202ENST00000413219 PIP4P1Q86T03 277 aa13.98□□□□□ -0.17
SDCBP-202ENST00000413219 PPP1R27Q86WC6 154 aa13.98□□□□□ -0.17
SDCBP-202ENST00000413219 OR1N2Q8NGR9 330 aa13.98□□□□□ -0.17
SDCBP-202ENST00000413219 SRSF8Q9BRL6 282 aaKnown RBP13.98□□□□□ -0.17
SDCBP-202ENST00000413219 SHANK2-AS3Q9BTD1 123 aa13.98□□□□□ -0.17
SDCBP-202ENST00000413219 COLQQ9Y215 455 aaPredicted RBP13.98□□□□□ -0.17
SDCBP-202ENST00000413219 CNTFRP26992 372 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 CCL17Q92583 94 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 PSG8Q9UQ74 426 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 H3BRN7 92 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 PSG3Q16557 428 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 TMEM97Q5BJF2 176 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 Q6ZS92 163 aa13.97□□□□□ -0.17
SDCBP-202ENST00000413219 TNRC18O15417 2968 aaPredicted RBP13.96□□□□□ -0.17
SDCBP-202ENST00000413219 K7EM74 188 aa13.96□□□□□ -0.17
SDCBP-202ENST00000413219 APELAP0DMC3 54 aa13.96□□□□□ -0.17
SDCBP-202ENST00000413219 SIGLEC15Q6ZMC9 328 aa13.96□□□□□ -0.17
SDCBP-202ENST00000413219 U3KQK5 164 aa13.96□□□□□ -0.17
SDCBP-202ENST00000413219 PRRC2CQ9Y520 2896 aaKnown RBP13.96□□□□□ -0.18
SDCBP-202ENST00000413219 PLCE1Q9P212 2302 aa13.96□□□□□ -0.18
SDCBP-202ENST00000413219 TRAV8-6A0A0B4J262 113 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 IGKV1-17P01599 117 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 Q71RC1 249 aaPredicted RBP13.95□□□□□ -0.18
SDCBP-202ENST00000413219 SMIM15Q7Z3B0 74 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 FAM57AQ8TBR7 257 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 IGHV1-3A0A0C4DH29 117 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 C7orf71A4D174 169 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 C16orf97H3BN30 126 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 NCR2O95944 276 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 IGLV1-47P01700 117 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 FGF6P10767 208 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 LGALS9CQ6DKI2 356 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 IGF2-ASQ6U949 168 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 WFDC8Q8IUA0 241 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 INSIG2Q9Y5U4 225 aa13.95□□□□□ -0.18
SDCBP-202ENST00000413219 DSPP15924 2871 aaKnown RBP13.95□□□□□ -0.18
SDCBP-202ENST00000413219 RBP4P02753 201 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 FTH1P19P0C7X4 201 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 RNF5Q99942 180 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 NCOR1O75376 2440 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 GAGE12BA1L429 117 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 VSTM5A8MXK1 200 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 K7ERU9 68 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 APOBEC3AP31941 199 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-202ENST00000413219 CRIP1P50238 77 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 BSPH1Q075Z2 132 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 VPS25Q9BRG1 176 aa13.94□□□□□ -0.18
SDCBP-202ENST00000413219 TIMM8BQ9Y5J9 83 aaPredicted RBP13.94□□□□□ -0.18
SDCBP-202ENST00000413219 A0A096LNJ9 63 aa13.93□□□□□ -0.18
SDCBP-202ENST00000413219 ICE1Q9Y2F5 2266 aa13.93□□□□□ -0.18
SDCBP-202ENST00000413219 ARFGEF3Q5TH69 2177 aa13.93□□□□□ -0.18
SDCBP-202ENST00000413219 MRPS12O15235 138 aaKnown RBP13.92□□□□□ -0.18
SDCBP-202ENST00000413219 CT45A10P0DMU9 189 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 IFI27P40305 119 aaPredicted RBP13.92□□□□□ -0.18
SDCBP-202ENST00000413219 PRSS33Q8NF86 280 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 A6NDN8 102 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 H3BRM9 83 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 BUB1B-PAK6H3BSN5 160 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 SIVA1O15304 175 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 FAM104BQ5XKR9 115 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 S100A7AQ86SG5 101 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 BOD1L2Q8IYS8 172 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 OR9G4Q8NGQ1 327 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 RNASE6Q93091 150 aaKnown RBP13.92□□□□□ -0.18
SDCBP-202ENST00000413219 C17orf77Q96MU5 243 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 SIGLEC8Q9NYZ4 499 aa13.92□□□□□ -0.18
SDCBP-202ENST00000413219 SERTM2A0A1B0GWG4 89 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 K7EIM0 57 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 PDE6HQ13956 83 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 FBXL15Q9H469 300 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 THBDP07204 575 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 GTF2H5Q6ZYL4 71 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 ORMDL3Q8N138 153 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 ZNF491Q8N8L2 437 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 DEFB124Q8NES8 71 aa13.91□□□□□ -0.18
SDCBP-202ENST00000413219 PRELID3AQ96N28 172 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms