RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 GLRXP35754 106 aa11.25□□□□□ -0.61
CLTCL1-201ENST00000412649 EVI2AP22794 236 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 ZNF134P52741 427 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 CACNA1EQ15878 2313 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 FREM1Q5H8C1 2179 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 CCL3L1P16619 93 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 TMEM262E9PQX1 116 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 SPATA12Q7Z6I5 190 aa11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-201ENST00000412649 SMKR1H3BMG3 65 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 K7ERJ3 54 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 IGLV2-8P01709 118 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 SIGLEC8Q9NYZ4 499 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 PCDH15Q96QU1 1955 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 F5H697 171 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 SS18L1O75177 396 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 TGFAP01135 160 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 MFAP4P55083 255 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 DPF1Q92782 380 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 PCP2Q8IVA1 136 aa11.23□□□□□ -0.61
CLTCL1-201ENST00000412649 H3BMG7 143 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 J3KRW8 73 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 CEACAM3P40198 252 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 BRWD1-AS2P59051 145 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 Q6ZR03 302 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 ZCCHC24Q8N2G6 241 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 A8MWV9 139 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 MORN5Q5VZ52 161 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
CLTCL1-201ENST00000412649 TMEM213A2RRL7 107 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 DAZAP2Q15038 168 aaPredicted RBP11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 ASCL2Q99929 193 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 CPAMD8Q8IZJ3 1885 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 LTAP01374 205 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 LOXL3P58215 753 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 FBXL15Q9H469 300 aa11.21□□□□□ -0.61
CLTCL1-201ENST00000412649 RNF125Q96EQ8 232 aa11.21□□□□□ -0.62
CLTCL1-201ENST00000412649 VKORC1Q9BQB6 163 aa11.21□□□□□ -0.62
CLTCL1-201ENST00000412649 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.62
CLTCL1-201ENST00000412649 POU2AF1Q16633 256 aa11.21□□□□□ -0.62
CLTCL1-201ENST00000412649 Q8TCH9 128 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 FAM167A-AS1Q96KT0 104 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 ZNF503Q96F45 646 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 CEP250Q9BV73 2442 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 IGHV1-18A0A0C4DH31 117 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 DEFB109BQ30KR1 87 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 SPRR3Q9UBC9 169 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 S4R3C0 116 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 NPIPB5A8MRT5 1133 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 PVRIGQ6DKI7 326 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 ARRDC1-AS1Q9H2J1 176 aa11.2□□□□□ -0.62
CLTCL1-201ENST00000412649 CEP350Q5VT06 3117 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 SH2D1AO60880 128 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 BOD1L2Q8IYS8 172 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 SYT8Q8NBV8 401 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 TIMD4Q96H15 378 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 IGKV1OR2-108A0A075B7D4 117 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 CGB1A6NKQ9 187 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 CEND1Q8N111 149 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 DKK2Q9UBU2 259 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 ROS1P08922 2347 aa11.19□□□□□ -0.62
CLTCL1-201ENST00000412649 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 PRRG2O14669 202 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 PLNP26678 52 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 SH2D6Q7Z4S9 175 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms