RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 OR2D3Q8NGH3 330 aa12.56□□□□□ -0.4
HOXD3-202ENST00000410016 M0QZK8 103 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 HTR1DP28221 377 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 ARF6P62330 175 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 PRR31Q5SQ13 230 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 Q86TA4 180 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 GFRA4Q9GZZ7 299 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 DPM3Q9P2X0 92 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 G0S2P27469 103 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 FBLN7Q53RD9 439 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 CIARTQ8N365 385 aaPredicted RBP12.55□□□□□ -0.4
HOXD3-202ENST00000410016 IGFBPL1Q8WX77 278 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 HILPDAQ9Y5L2 63 aa12.55□□□□□ -0.4
HOXD3-202ENST00000410016 OVOL3O00110 214 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 ZNF491Q8N8L2 437 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 NPBQ8NG41 125 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 SHANK2-AS3Q9BTD1 123 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 SOX21Q9Y651 276 aaPredicted RBP12.54□□□□□ -0.4
HOXD3-202ENST00000410016 TRBV19A0A075B6N1 114 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 FAM231BA6NCW3 169 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 NBR2O15453 112 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 HSBP1O75506 76 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 NDUFA3O95167 84 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 C16orf54Q6UWD8 224 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 GOLT1AQ6ZVE7 132 aa12.54□□□□□ -0.4
HOXD3-202ENST00000410016 ARHGAP32A7KAX9 2087 aa12.53□□□□□ -0.4
HOXD3-202ENST00000410016 CCL21O00585 134 aa12.53□□□□□ -0.4
HOXD3-202ENST00000410016 IGLC2P0DOY2 106 aa12.53□□□□□ -0.4
HOXD3-202ENST00000410016 CD24P25063 80 aa12.53□□□□□ -0.4
HOXD3-202ENST00000410016 SPATA45Q537H7 98 aa12.53□□□□□ -0.4
HOXD3-202ENST00000410016 EBLN2Q6P2I7 272 aa12.53□□□□□ -0.4
HOXD3-202ENST00000410016 RBPMS2Q6ZRY4 209 aaKnown RBP12.53□□□□□ -0.4
HOXD3-202ENST00000410016 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
HOXD3-202ENST00000410016 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.4
HOXD3-202ENST00000410016 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.4
HOXD3-202ENST00000410016 H3BRN7 92 aa12.52□□□□□ -0.4
HOXD3-202ENST00000410016 LCN12Q6JVE5 192 aa12.52□□□□□ -0.4
HOXD3-202ENST00000410016 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
HOXD3-202ENST00000410016 ODF3BA8MYP8 253 aa12.52□□□□□ -0.41
HOXD3-202ENST00000410016 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.41
HOXD3-202ENST00000410016 APOHP02749 345 aaPredicted RBP12.52□□□□□ -0.41
HOXD3-202ENST00000410016 KLF17Q5JT82 389 aaPredicted RBP12.52□□□□□ -0.41
HOXD3-202ENST00000410016 PRNTQ86SH4 94 aa12.52□□□□□ -0.41
HOXD3-202ENST00000410016 BPIFA4PQ86YQ2 179 aa12.52□□□□□ -0.41
HOXD3-202ENST00000410016 RAB1BQ9H0U4 201 aa12.52□□□□□ -0.41
HOXD3-202ENST00000410016 CIDEAO60543 219 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 TOX4O94842 621 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 COL8A1P27658 744 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
HOXD3-202ENST00000410016 KLRD1Q13241 179 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 SIGLEC15Q6ZMC9 328 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 M0R2Z0 102 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
HOXD3-202ENST00000410016 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
HOXD3-202ENST00000410016 FANCD2OSQ96PS1 177 aa12.51□□□□□ -0.41
HOXD3-202ENST00000410016 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 M0R1W7 72 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 PRTN3P24158 256 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 BCL6BQ8N143 479 aaPredicted RBP12.5□□□□□ -0.41
HOXD3-202ENST00000410016 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 RNF24Q9Y225 148 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 HRNRQ86YZ3 2850 aaPredicted RBP12.5□□□□□ -0.41
HOXD3-202ENST00000410016 C5orf64Q2M2E5 130 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 C11orf71Q6IPW1 123 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 NBASA2RRP1 2371 aa12.5□□□□□ -0.41
HOXD3-202ENST00000410016 LOC105371242A0A075B767 164 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 IL4P05112 153 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 CEACAM3P40198 252 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 MAJINQ3KP22 176 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 FAM120AOSQ5T036 256 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 KIR3DL3Q8N743 410 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 OR4F17Q8NGA8 305 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 TMEM190Q8WZ59 177 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 ZC2HC1AQ96GY0 325 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 TIMD4Q96H15 378 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 F8W735 103 aaPredicted RBP12.49□□□□□ -0.41
HOXD3-202ENST00000410016 HAX1O00165 279 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
HOXD3-202ENST00000410016 ATOH7Q8N100 152 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 ZNF414Q96IQ9 312 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 NDFIP1Q9BT67 221 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 UQCR10Q9UDW1 63 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 S4R3C0 116 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
HOXD3-202ENST00000410016 IGLV11-55A0A075B6I3 123 aa12.48□□□□□ -0.41
HOXD3-202ENST00000410016 M0QZ24 198 aa12.48□□□□□ -0.41
HOXD3-202ENST00000410016 HLA-DRB1P01911 266 aa12.48□□□□□ -0.41
HOXD3-202ENST00000410016 PMCHL1Q16048 86 aa12.48□□□□□ -0.41
HOXD3-202ENST00000410016 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
HOXD3-202ENST00000410016 ZFP30Q9Y2G7 519 aa12.48□□□□□ -0.41
HOXD3-202ENST00000410016 LOC102724200A0A096LPH7 203 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms