RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GGTLC1Q9BX51 225 aa4.4□□□□□ -1.71
CLK1-202ENST00000409403 SPRY4Q9C004 299 aa4.4□□□□□ -1.71
CLK1-202ENST00000409403 MTCH1Q9NZJ7 389 aa4.4□□□□□ -1.71
CLK1-202ENST00000409403 CLCF1Q9UBD9 225 aa4.4□□□□□ -1.71
CLK1-202ENST00000409403 CCL26Q9Y258 94 aa4.4□□□□□ -1.71
CLK1-202ENST00000409403 YTHDF2Q9Y5A9 579 aaKnown RBP4.4□□□□□ -1.71
CLK1-202ENST00000409403 MAP1AP78559 2803 aaPredicted RBP4.4□□□□□ -1.71
CLK1-202ENST00000409403 K7EM74 188 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 OVOL3O00110 214 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 IGKV1-5P01602 117 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 MGST1P10620 155 aaKnown RBP4.39□□□□□ -1.71
CLK1-202ENST00000409403 KLRD1Q13241 179 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 C10orf128Q5T292 105 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 TMEM42Q69YG0 159 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 ADAMTSL5Q6ZMM2 481 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 FOXL2NBQ6ZUU3 175 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 C2orf91Q6ZV80 131 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 GCSAMQ8N6F7 178 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 CT55Q8WUE5 264 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 FAM131CQ96AQ9 280 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 OXGR1Q96P68 337 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 VGLL1Q99990 258 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 SPXQ9BT56 116 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
CLK1-202ENST00000409403 ZNF835Q9Y2P0 537 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 LOXL2Q9Y4K0 774 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
CLK1-202ENST00000409403 SNRNP200O75643 2136 aaKnown RBP4.39□□□□□ -1.71
CLK1-202ENST00000409403 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
CLK1-202ENST00000409403 IGHV1-24A0A0C4DH33 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 H0YIG0 161 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 GAGE7O76087 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CA1P00915 261 aaPredicted RBP4.38□□□□□ -1.71
CLK1-202ENST00000409403 GAGE12FP0CL80 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 GAGE12GP0CL81 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 GAGE12IP0CL82 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CT45A10P0DMU9 189 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CCL2P13500 99 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CSN1S1P47710 185 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 MFAP2P55001 183 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 TCTAP57738 103 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 TAS2R45P59539 299 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 FGF12P61328 243 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 HBBP68871 147 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 C17orf67Q0P5P2 114 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 GAGE4Q13068 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CEACAM16Q2WEN9 425 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 PRR30Q53SZ7 412 aaPredicted RBP4.38□□□□□ -1.71
CLK1-202ENST00000409403 DMRTC1Q5HYR2 192 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 PAPPA-AS1Q5QFB9 102 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 FAM120AOSQ5T036 256 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 ZNF841Q6ZN19 808 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 ANKRD37Q7Z713 158 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 DOLPP1Q86YN1 238 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 MKXQ8IYA7 352 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 OR52E5Q8NH55 327 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 OR1L1Q8NH94 360 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 C19orf24Q9BVV8 132 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 DEC1Q9P2X7 70 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 ANK2Q01484 3957 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 KBTBD11-OT1A0A1B0GTJ5 212 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 A0A1W2PRE2 83 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 C21orf140B9A014 251 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 FNDC10F2Z333 226 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 SYNGR1O43759 233 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 IGKV1-39P01597 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 IGKV1D-39P04432 117 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 IGKV3-11P04433 115 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 SCTP09683 121 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 EDDM3BP56851 147 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 MEF2CQ06413 473 aaPredicted RBP4.38□□□□□ -1.71
CLK1-202ENST00000409403 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 SLC25A53Q5H9E4 307 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 SLC35E4Q6ICL7 350 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 BOD1L2Q8IYS8 172 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 FGFRL1Q8N441 504 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 ZNF524Q96C55 264 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CYYR1Q96J86 154 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 CITED2Q99967 270 aaPredicted RBP4.38□□□□□ -1.71
CLK1-202ENST00000409403 ANAPC13Q9BS18 74 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 EMC6Q9BV81 110 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 SH2D2AQ9NP31 389 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 TECRQ9NZ01 308 aaKnown RBP4.38□□□□□ -1.71
CLK1-202ENST00000409403 HIGD1BQ9P298 99 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
CLK1-202ENST00000409403 TDRD6O60522 2096 aaKnown RBP4.37□□□□□ -1.71
CLK1-202ENST00000409403 IGKV1-27A0A075B6S5 117 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 IGKV1-12A0A0C4DH73 117 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 A0A0G2JNG1 304 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.37□□□□□ -1.71
CLK1-202ENST00000409403 KLF7O75840 302 aaPredicted RBP4.37□□□□□ -1.71
CLK1-202ENST00000409403 CLDN14O95500 239 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 IGKV1D-12P01611 117 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 IGHV3-7P01780 117 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 SPINK8P0C7L1 97 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 IGHV4-30-4P0DP06 118 aa4.37□□□□□ -1.71
CLK1-202ENST00000409403 ACP1P24666 158 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms