RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 RFNGQ9Y644 331 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 TMEM86BQ8N661 226 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 AGMATQ9BSE5 352 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 CKS1BP61024 79 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 PSG3Q16557 428 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 COL6A6A6NMZ7 2263 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 CFHR2P36980 270 aa20.32■□□□□ 0.84
SPIRE1-202ENST00000409402 NTF4P34130 210 aa20.31■□□□□ 0.84
SPIRE1-202ENST00000409402 LAGE3Q14657 143 aa20.31■□□□□ 0.84
SPIRE1-202ENST00000409402 CHCHD1Q96BP2 118 aaKnown RBP20.31■□□□□ 0.84
SPIRE1-202ENST00000409402 SH2D1AO60880 128 aa20.3■□□□□ 0.84
SPIRE1-202ENST00000409402 SRSF3P84103 164 aaKnown RBP20.3■□□□□ 0.84
SPIRE1-202ENST00000409402 Q8TAT8 98 aa20.3■□□□□ 0.84
SPIRE1-202ENST00000409402 DEFB131AP59861 70 aa20.29■□□□□ 0.84
SPIRE1-202ENST00000409402 LYZL1Q6UWQ5 148 aa20.29■□□□□ 0.84
SPIRE1-202ENST00000409402 TRAV1-1A0A0B4J248 108 aa20.29■□□□□ 0.84
SPIRE1-202ENST00000409402 OR5A1Q8NGJ0 315 aa20.29■□□□□ 0.84
SPIRE1-202ENST00000409402 AKAP6Q13023 2319 aa20.29■□□□□ 0.84
SPIRE1-202ENST00000409402 IGFL4Q6B9Z1 124 aa20.29■□□□□ 0.84
SPIRE1-202ENST00000409402 C15orf62A8K5M9 175 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 FNDC10F2Z333 226 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 CACNA1DQ01668 2161 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 FAM215AQ9Y5M1 114 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 LMO1P25800 156 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 PLNP26678 52 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 MYO7BQ6PIF6 2116 aa20.28■□□□□ 0.84
SPIRE1-202ENST00000409402 TSPAN13O95857 204 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 IGKCP01834 107 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 LINC00158P58513 81 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 FHL1Q13642 323 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 TMEM249Q2WGJ8 235 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 MORN3Q6PF18 240 aaPredicted RBP20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 A0A1W2PPI3 338 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 Q6ZR03 302 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 Q71RC1 249 aaPredicted RBP20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 NIT1Q86X76 327 aa20.27■□□□□ 0.84
SPIRE1-202ENST00000409402 RPP25LQ8N5L8 163 aaKnown RBP20.26■□□□□ 0.83
SPIRE1-202ENST00000409402 ZNRD1Q9P1U0 126 aa20.26■□□□□ 0.83
SPIRE1-202ENST00000409402 TTC32Q5I0X7 151 aa20.26■□□□□ 0.83
SPIRE1-202ENST00000409402 NCOR1P1Q9H4R4 102 aa20.26■□□□□ 0.83
SPIRE1-202ENST00000409402 PI4KAP42356 2102 aa20.26■□□□□ 0.83
SPIRE1-202ENST00000409402 SHANK2-AS3Q9BTD1 123 aa20.26■□□□□ 0.83
SPIRE1-202ENST00000409402 IFI27L1Q96BM0 104 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 TRAV2A0A0B4J234 112 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 DEFB130BP0DP73 79 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 DEFB130AP0DP74 79 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 AMBPP02760 352 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 S100A7L2Q5SY68 101 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 REG4Q9BYZ8 158 aa20.25■□□□□ 0.83
SPIRE1-202ENST00000409402 NCR2O95944 276 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 HS3ST6Q96QI5 342 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 LINC01559Q495D7 138 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 C11orf68Q9H3H3 251 aaKnown RBP20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 MED12Q93074 2177 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 IGLV1-44P01699 117 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 TCF15Q12870 199 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 D6R8Y8 96 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 VCYO14598 125 aa20.24■□□□□ 0.83
SPIRE1-202ENST00000409402 LOXP28300 417 aaPredicted RBP20.23■□□□□ 0.83
SPIRE1-202ENST00000409402 ZNF815PA8K554 130 aa20.23■□□□□ 0.83
SPIRE1-202ENST00000409402 TEX36Q5VZQ5 186 aa20.23■□□□□ 0.83
SPIRE1-202ENST00000409402 MCRIP2Q9BUT9 160 aaKnown RBP20.23■□□□□ 0.83
SPIRE1-202ENST00000409402 CYTL1Q9NRR1 136 aa20.23■□□□□ 0.83
SPIRE1-202ENST00000409402 ZNF833PQ6ZTB9 187 aa20.23■□□□□ 0.83
SPIRE1-202ENST00000409402 IGHV3-64A0A075B6Q5 118 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 TDGF1P3P51864 188 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 TEX43Q6ZNM6 134 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 NDUFB8O95169 186 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 ARTNQ5T4W7 220 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 SMPXQ9UHP9 88 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 FOXL1Q12952 345 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 PDE6HQ13956 83 aa20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 CD300EQ496F6 205 aaPredicted RBP20.22■□□□□ 0.83
SPIRE1-202ENST00000409402 MLANAQ16655 118 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 A0A0U1RRA0 63 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 LINC00518Q8N0U6 118 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 LINC00587B1AMM8 73 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 A0A1B0GWB2 263 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 E9PQ18 207 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 SEC11AP67812 179 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 PAX2Q02962 417 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 ERCC8Q13216 396 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 RASL11AQ6T310 242 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 C1orf122Q6ZSJ8 110 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 TMEM242Q9NWH2 141 aa20.21■□□□□ 0.83
SPIRE1-202ENST00000409402 A0A0G2JRQ6 117 aa20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 SLC25A2Q9BXI2 301 aa20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 C14orf178Q8N769 122 aaPredicted RBP20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 LSM4Q9Y4Z0 139 aaKnown RBP20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 GPR179Q6PRD1 2367 aa20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 ATRAIDQ6UW56 229 aa20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 A0A1B0GW64 132 aa20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 G3V318 75 aa20.2■□□□□ 0.82
SPIRE1-202ENST00000409402 YPEL3P61236 119 aaPredicted RBP20.19■□□□□ 0.82
SPIRE1-202ENST00000409402 LY96Q9Y6Y9 160 aa20.19■□□□□ 0.82
SPIRE1-202ENST00000409402 DERL1Q9BUN8 251 aa20.19■□□□□ 0.82
SPIRE1-202ENST00000409402 IL17RELQ6ZVW7 336 aa20.18■□□□□ 0.82
SPIRE1-202ENST00000409402 LINC01551Q86U37 167 aa20.18■□□□□ 0.82
SPIRE1-202ENST00000409402 RASL10AQ92737 203 aa20.18■□□□□ 0.82
SPIRE1-202ENST00000409402 IGLV3-9A0A075B6K5 115 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms