RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 C16orf54Q6UWD8 224 aa15.58■□□□□ 0.08
C4orf48-201ENST00000409248 PATE2Q6UY27 113 aa15.58■□□□□ 0.08
C4orf48-201ENST00000409248 GATAD1Q8WUU5 269 aa15.58■□□□□ 0.08
C4orf48-201ENST00000409248 SHANK2-AS3Q9BTD1 123 aa15.58■□□□□ 0.08
C4orf48-201ENST00000409248 TUBA4BQ9H853 241 aa15.58■□□□□ 0.08
C4orf48-201ENST00000409248 ZNF98A6NK75 572 aa15.57■□□□□ 0.08
C4orf48-201ENST00000409248 TCF24Q7RTU0 167 aa15.57■□□□□ 0.08
C4orf48-201ENST00000409248 C9orf62Q8N4C0 152 aa15.57■□□□□ 0.08
C4orf48-201ENST00000409248 TMEM37Q8WXS4 190 aa15.57■□□□□ 0.08
C4orf48-201ENST00000409248 UHRF2Q96PU4 802 aa15.57■□□□□ 0.08
C4orf48-201ENST00000409248 HELTA6NFD8 242 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 CD7P09564 240 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 LINC00305Q7Z4B0 112 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 OR2G3Q8NGZ4 309 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 GLMPQ8WWB7 406 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 SCRT1Q9BWW7 348 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 SLC25A22Q9H936 323 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 C19orf73Q9NVV2 129 aa15.56■□□□□ 0.08
C4orf48-201ENST00000409248 OR4C46A6NHA9 309 aa15.55■□□□□ 0.08
C4orf48-201ENST00000409248 RPL11P62913 178 aaKnown RBP15.55■□□□□ 0.08
C4orf48-201ENST00000409248 ACOT6Q3I5F7 207 aaPredicted RBP15.55■□□□□ 0.08
C4orf48-201ENST00000409248 GCSAMLQ5JQS6 135 aa15.55■□□□□ 0.08
C4orf48-201ENST00000409248 OR8I2Q8N0Y5 310 aa15.55■□□□□ 0.08
C4orf48-201ENST00000409248 ASCL2Q99929 193 aa15.55■□□□□ 0.08
C4orf48-201ENST00000409248 SH3BGRL3Q9H299 93 aa15.55■□□□□ 0.08
C4orf48-201ENST00000409248 OR11H12B2RN74 326 aa15.54■□□□□ 0.08
C4orf48-201ENST00000409248 NKX2-5P52952 324 aaPredicted RBP15.54■□□□□ 0.08
C4orf48-201ENST00000409248 SERF2P84101 59 aa15.54■□□□□ 0.08
C4orf48-201ENST00000409248 SIGLEC15Q6ZMC9 328 aa15.54■□□□□ 0.08
C4orf48-201ENST00000409248 GPR82Q96P67 336 aa15.54■□□□□ 0.08
C4orf48-201ENST00000409248 SLC25A32Q9H2D1 315 aa15.54■□□□□ 0.08
C4orf48-201ENST00000409248 RFNGQ9Y644 331 aa15.54■□□□□ 0.08
C4orf48-201ENST00000409248 MBP02144 154 aa15.53■□□□□ 0.08
C4orf48-201ENST00000409248 TPT1P13693 172 aaKnown RBP15.53■□□□□ 0.08
C4orf48-201ENST00000409248 FAM90A2PQ658T7 463 aa15.53■□□□□ 0.08
C4orf48-201ENST00000409248 LEMD1Q68G75 181 aa15.53■□□□□ 0.08
C4orf48-201ENST00000409248 MRPL32Q9BYC8 188 aaKnown RBP15.53■□□□□ 0.08
C4orf48-201ENST00000409248 RPL7P18124 248 aaKnown RBP15.52■□□□□ 0.08
C4orf48-201ENST00000409248 M6PRP20645 277 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 GALR1P47211 349 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 PAFAH1B2P68402 229 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 FAM78BQ5VT40 261 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 SBSPONQ8IVN8 264 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 STOML3Q8TAV4 291 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 SRD5A3Q9H8P0 318 aa15.52■□□□□ 0.08
C4orf48-201ENST00000409248 IGKV3-7A0A075B6H7 116 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 RHOBP62745 196 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 SLC51BQ86UW2 128 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 BAP18Q8IXM2 172 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 DEFB125Q8N687 156 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 WFDC10AQ9H1F0 79 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 FUT9Q9Y231 359 aa15.51■□□□□ 0.07
C4orf48-201ENST00000409248 DNASE2O00115 360 aaPredicted RBP15.5■□□□□ 0.07
C4orf48-201ENST00000409248 SPP1P10451 314 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 RAB2AP61019 212 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 AKR1C8PQ5T2L2 129 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 MORN5Q5VZ52 161 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 STXBP6Q8NFX7 210 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 OR10G4Q8NGN3 311 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 OR10G9Q8NGN4 311 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 OR10G7Q8NGN6 311 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 ZMAT4Q9H898 229 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 SEPSECSQ9HD40 501 aaKnown RBP15.5■□□□□ 0.07
C4orf48-201ENST00000409248 U3KQK5 164 aa15.5■□□□□ 0.07
C4orf48-201ENST00000409248 A0A1W2PPV4 95 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 SEC11BP0C7V7 166 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 TMEM41BQ5BJD5 291 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 MIR17HGQ75NE6 70 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 BPIFA4PQ86YQ2 179 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 GBGT1Q8N5D6 347 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 FAM110AQ9BQ89 295 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 MS4A6AQ9H2W1 248 aa15.49■□□□□ 0.07
C4orf48-201ENST00000409248 COL7A1Q02388 2944 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 TRAV2A0A0B4J234 112 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 TRAV5A0A0B4J249 113 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 BOLA2-SMG1P6H3BVE0 249 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 ATF4P18848 351 aaPredicted RBP15.48■□□□□ 0.07
C4orf48-201ENST00000409248 TFPI2P48307 235 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 CMC4P56277 68 aaPredicted RBP15.48■□□□□ 0.07
C4orf48-201ENST00000409248 SPATA31B1PQ5VZV4 182 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 EIF5AL1Q6IS14 154 aaKnown RBP15.48■□□□□ 0.07
C4orf48-201ENST00000409248 FAM122CQ6P4D5 195 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 NRN1Q9NPD7 142 aa15.48■□□□□ 0.07
C4orf48-201ENST00000409248 TAS2R45P59539 299 aa15.47■□□□□ 0.07
C4orf48-201ENST00000409248 WFDC3Q8IUB2 231 aa15.47■□□□□ 0.07
C4orf48-201ENST00000409248 CDC34P49427 236 aaPredicted RBP15.46■□□□□ 0.07
C4orf48-201ENST00000409248 MEOX2P50222 304 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 HAGHQ16775 308 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 ODF3L2Q3SX64 289 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 SAMD13Q5VXD3 122 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 TM2D3Q9BRN9 247 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 SLC25A2Q9BXI2 301 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 UBQLN2Q9UHD9 624 aa15.46■□□□□ 0.07
C4orf48-201ENST00000409248 KHDC3LQ587J8 217 aa15.45■□□□□ 0.06
C4orf48-201ENST00000409248 LINC00322Q6ZN03 302 aaPredicted RBP15.45■□□□□ 0.06
C4orf48-201ENST00000409248 TMED6Q8WW62 240 aa15.45■□□□□ 0.06
C4orf48-201ENST00000409248 RCHY1Q96PM5 261 aa15.45■□□□□ 0.06
C4orf48-201ENST00000409248 SPATA25Q9BR10 227 aa15.45■□□□□ 0.06
C4orf48-201ENST00000409248 ACTR3CQ9C0K3 210 aaPredicted RBP15.45■□□□□ 0.06
C4orf48-201ENST00000409248 RPRMQ9NS64 109 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms