RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 MFAP4P55083 255 aa9.11□□□□□ -0.95
CHRNA1-203ENST00000409219 ZBTB34Q8NCN2 500 aa9.11□□□□□ -0.95
CHRNA1-203ENST00000409219 STXBP6Q8NFX7 210 aa9.11□□□□□ -0.95
CHRNA1-203ENST00000409219 LSM5Q9Y4Y9 91 aaKnown RBP9.11□□□□□ -0.95
CHRNA1-203ENST00000409219 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 IGHV3-48P01763 117 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 CATR1Q13166 79 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 OR1P1Q8NH06 330 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 MISP3Q96FF7 219 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 TXN2Q99757 166 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 XCL2Q9UBD3 114 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 VPS13BQ7Z7G8 4022 aa9.1□□□□□ -0.95
CHRNA1-203ENST00000409219 GNG7O60262 68 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 HTN3P15516 51 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 EMP1P54849 157 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 FAM3BP58499 235 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 EIF5AL1Q6IS14 154 aaKnown RBP9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 TMEM88Q6PEY1 159 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 OR51H1Q8NH63 302 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 PUS1Q9Y606 427 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 FLG2Q5D862 2391 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-203ENST00000409219 A0A1B0GU03 582 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 PITX3O75364 302 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 SCGB1D2O95969 90 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 MT-CO2P00403 227 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ID3Q02535 119 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 FAM74A1Q5RGS3 127 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNF705AQ6ZN79 300 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 FAM219AQ8IW50 185 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 RNF141Q8WVD5 230 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 NEU1Q99519 415 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 NIPSNAP3BQ9BS92 247 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ARV1Q9H2C2 271 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 FAM212BQ9NTI7 297 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 DKK2Q9UBU2 259 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 OR51B2Q9Y5P1 312 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNF705FA8MVS1 300 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNF705DP0CH99 300 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNF705BP0CI00 300 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 PVALBP20472 110 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ERVK-16P61578 105 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 FAM222AQ5U5X8 452 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 RPL7L1Q6DKI1 246 aaKnown RBP9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 CCDC28AQ8IWP9 274 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNRF2Q8NHG8 242 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 RAB40CQ96S21 281 aa9.08□□□□□ -0.96
CHRNA1-203ENST00000409219 TEX48A0A1B0GUV7 120 aa9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 NUTF2P61970 127 aaKnown RBP9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNF600Q6ZNG1 722 aa9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 TMED6Q8WW62 240 aa9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 PINX1Q96BK5 328 aaKnown RBP9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 SAT2Q96F10 170 aaPredicted RBP9.07□□□□□ -0.96
CHRNA1-203ENST00000409219 RAB19A4D1S5 217 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 IGKV1-39P01597 117 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 IGKV1D-39P04432 117 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 ZNF114Q8NC26 417 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 GPR146Q96CH1 333 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 ATG101Q9BSB4 218 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 LYRM2Q9NU23 88 aaPredicted RBP9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 UBR4Q5T4S7 5183 aa9.06□□□□□ -0.96
CHRNA1-203ENST00000409219 BORCS7-ASMTA0A0B4J1R7 106 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 A0A1W2PS18 150 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 KRASP01116 189 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 NPPCP23582 126 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 SULT1A2P50226 295 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 POLR2GP62487 172 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 SMIM8Q96KF7 97 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 RFNGQ9Y644 331 aa9.05□□□□□ -0.96
CHRNA1-203ENST00000409219 IGHV3OR16-12A0A075B7B8 117 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 A0A0G2JRQ6 117 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 HELTA6NFD8 242 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 SMIM9A6NGZ8 99 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 SEC11BP0C7V7 166 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 CRYBB3P26998 211 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 G6PCP35575 357 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 BAXQ07812 192 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 OR1S2Q8NGQ3 325 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 PRNDQ9UKY0 176 aa9.04□□□□□ -0.96
CHRNA1-203ENST00000409219 FAM90A26D6RGX4 464 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 H3BMM0 161 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 TEX46H3BTG2 121 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 ATG12O94817 140 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 P0C879 139 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 VAMP2P63027 116 aa9.03□□□□□ -0.96
CHRNA1-203ENST00000409219 BLOC1S1P78537 153 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms