RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 VCYO14598 125 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 IGHV1-46P01743 117 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 TIMP3P35625 211 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 EXOC3-AS1Q8N2X6 119 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 A0A1B0GTI1 187 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 EREGO14944 169 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 TRGV9Q99603 122 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 PTPRQQ9UMZ3 2332 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 MRPL14Q6P1L8 145 aaKnown RBP9.94□□□□□ -0.82
SMCR8-201ENST00000406438 FAM223AQ8IWN6 122 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 NR2C2APQ86WQ0 139 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 IFITM2Q01629 132 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF672Q499Z4 452 aaPredicted RBP9.94□□□□□ -0.82
SMCR8-201ENST00000406438 B4DSR2 109 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 RASL10AQ92737 203 aa9.94□□□□□ -0.82
SMCR8-201ENST00000406438 D6R8Y8 96 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 CSRP1P21291 193 aaKnown RBP9.93□□□□□ -0.82
SMCR8-201ENST00000406438 EFNA4P52798 201 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 CRIM1Q9NZV1 1036 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 IGLV3-32A0A0A0MS00 114 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 M0R1W7 72 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF876PQ49A33 203 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 LYZL4Q96KX0 146 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 IGHV1-8P0DP01 117 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 PSG1P11464 419 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 LCNL1Q6ZST4 164 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 ANAPC10Q9UM13 185 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 MLNRO43193 412 aa9.93□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF474Q6S9Z5 364 aaPredicted RBP9.93□□□□□ -0.82
SMCR8-201ENST00000406438 IGHV1-3A0A0C4DH29 117 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 TNFSF13O75888 250 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 RIPPLY3P57055 190 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 NUP210LQ5VU65 1888 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 FAM90A2PQ658T7 463 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 FXYD7P58549 80 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 PIP4P2Q8N4L2 257 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 RNF166Q96A37 237 aaPredicted RBP9.92□□□□□ -0.82
SMCR8-201ENST00000406438 FCN3O75636 299 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 SCRT1Q9BWW7 348 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 TRAV8-1A0A0A6YYK1 113 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 LINC00527Q9UJ94 153 aa9.92□□□□□ -0.82
SMCR8-201ENST00000406438 RNF222A6NCQ9 220 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 TBX6O95947 436 aaPredicted RBP9.91□□□□□ -0.82
SMCR8-201ENST00000406438 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 RBMY1FQ15415 496 aaKnown RBP9.91□□□□□ -0.82
SMCR8-201ENST00000406438 TPTE2P1Q5T6R2 138 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BKO60814 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BJP06899 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BOP23527 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BBP33778 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BDP58876 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BCP62807 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST2H2BEQ16778 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HEPN1Q6WQI6 88 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BHQ93079 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BNQ99877 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 HIST1H2BMQ99879 126 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 CFHR1Q03591 330 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 FOXF2Q12947 444 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 LCN12Q6JVE5 192 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 LSM4Q9Y4Z0 139 aaKnown RBP9.91□□□□□ -0.82
SMCR8-201ENST00000406438 DLX4Q92988 240 aaPredicted RBP9.91□□□□□ -0.82
SMCR8-201ENST00000406438 H3BUX3 64 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 C1QL4Q86Z23 238 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
SMCR8-201ENST00000406438 TFF1P04155 84 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 NDPQ00604 133 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 C2orf82Q6UX34 121 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 CREBBPQ92793 2442 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 BUB1B-PAK6H3BSN5 160 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 TNFRSF6BO95407 300 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 PSG3Q16557 428 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 F8VVB4 439 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 F8VWA3 439 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 KLRD1Q13241 179 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 GGTLC1Q9BX51 225 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF319Q9P2F9 582 aa9.9□□□□□ -0.82
SMCR8-201ENST00000406438 RNF5Q99942 180 aa9.9□□□□□ -0.83
SMCR8-201ENST00000406438 AGRNO00468 2067 aa9.9□□□□□ -0.83
SMCR8-201ENST00000406438 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 RPRMLQ8N4K4 120 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 A0A1B0GWJ7 208 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 SRRM5B3KS81 715 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 MYMXA0A1B0GTQ4 84 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 C5orf64Q2M2E5 130 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 TREML4Q6UXN2 200 aa9.89□□□□□ -0.83
SMCR8-201ENST00000406438 LHFPL4Q7Z7J7 247 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms