RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ATP5IP56385 69 aaPredicted RBP9.53□□□□□ -0.88
RBM39-206ENST00000403542 C5orf17Q8NAS9 161 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 ABHD17AQ96GS6 310 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 RBM14Q96PK6 669 aaKnown RBP9.53□□□□□ -0.88
RBM39-206ENST00000403542 HIGD1AQ9Y241 93 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 NCOR2Q9Y618 2525 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 CEACAM4O75871 244 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 ARMS2P0C7Q2 107 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 FOXE3Q13461 319 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 FAM120AOSQ5T036 256 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
RBM39-206ENST00000403542 MLST8Q9BVC4 326 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 TMEM133Q9H2Q1 129 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 SIGLEC9Q9Y336 463 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 IGHV2-26A0A0B4J1V2 119 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 CBY3A6NI87 242 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 PPP1R27Q86WC6 154 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 TEX45Q8NA69 505 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 NUP37Q8NFH4 326 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 OR4F17Q8NGA8 305 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 SLC25A39Q9BZJ4 359 aaPredicted RBP9.53□□□□□ -0.88
RBM39-206ENST00000403542 E7EQL1 145 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 NUDT3O95989 172 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 LTAP01374 205 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 LINC00614P0C842 121 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 VAMP3Q15836 100 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 TMEM155Q4W5P6 130 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 GFRALQ6UXV0 394 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 RASL11BQ9BPW5 248 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 OR2J3O76001 311 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 TOMM40O96008 361 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 FAM106CPP0CH98 169 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 KLF5Q13887 457 aaPredicted RBP9.52□□□□□ -0.89
RBM39-206ENST00000403542 FAM106AQ4KMX7 169 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 IGFL4Q6B9Z1 124 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
RBM39-206ENST00000403542 C8orf46Q8TAG6 207 aa9.52□□□□□ -0.89
RBM39-206ENST00000403542 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 IGHV1-69-2A0A0G2JMI3 117 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 CRYABP02511 175 aaKnown RBP9.51□□□□□ -0.89
RBM39-206ENST00000403542 MC5RP33032 325 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 RNF151Q2KHN1 245 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 Q86TA4 180 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 STXBP6Q8NFX7 210 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 RPEQ96AT9 228 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 A0A087X0K7 114 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 PCP4P48539 62 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 DLX6P56179 175 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 ETFRF1Q6IPR1 90 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 TMEM116Q8NCL8 245 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 LINC01560Q8TB33 94 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 FMC1Q96HJ9 113 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 TRGV9Q99603 122 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 CHRDL1Q9BU40 450 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
RBM39-206ENST00000403542 LOC102724200A0A096LPH7 203 aaPredicted RBP9.5□□□□□ -0.89
RBM39-206ENST00000403542 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 IGLC1P0CG04 106 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
RBM39-206ENST00000403542 RASL11AQ6T310 242 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 MRPL52Q86TS9 123 aaKnown RBP9.5□□□□□ -0.89
RBM39-206ENST00000403542 OR4A5Q8NH83 315 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 PRSS22Q9GZN4 317 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 COX11Q9Y6N1 276 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 TEX22C9J3V5 150 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 IL4P05112 153 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 LGALS7P47929 136 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 FBLN7Q53RD9 439 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 C8orf49Q96NF6 230 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 SPTBN4Q9H254 2564 aa9.5□□□□□ -0.89
RBM39-206ENST00000403542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.49□□□□□ -0.89
RBM39-206ENST00000403542 IGKV1-17P01599 117 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 APOHP02749 345 aaPredicted RBP9.49□□□□□ -0.89
RBM39-206ENST00000403542 CRYGCP07315 174 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 HES1Q14469 280 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 IGFL3Q6UXB1 125 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 ATP5L2Q7Z4Y8 100 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 ZNF738Q8NE65 137 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 F11RQ9Y624 299 aaKnown RBP9.49□□□□□ -0.89
RBM39-206ENST00000403542 ZNF785A8K8V0 405 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 IGLV2-11P01706 119 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 GRNP28799 593 aaKnown RBP9.49□□□□□ -0.89
RBM39-206ENST00000403542 ARF6P62330 175 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 LOXL1Q08397 574 aaPredicted RBP9.49□□□□□ -0.89
RBM39-206ENST00000403542 BUB1B-PAK6H3BSN5 160 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 TIMM23O14925 209 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 NCR2O95944 276 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 KLRD1Q13241 179 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 OR8A1Q8NGG7 326 aa9.49□□□□□ -0.89
RBM39-206ENST00000403542 MRPS16Q9Y3D3 137 aaKnown RBP9.49□□□□□ -0.89
RBM39-206ENST00000403542 CUBNO60494 3623 aa9.48□□□□□ -0.89
RBM39-206ENST00000403542 PPIAL4CA0A0B4J2A2 164 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms